Diachasma alloeum: 107041037
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Entry
107041037 CDS
T07663
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dam
Diachasma alloeum
Pathway
dam03013
Nucleocytoplasmic transport
dam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107041037
03015 mRNA surveillance pathway
107041037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107041037
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107041037
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107041037
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
SMC_ScpB
Motif
Other DBs
NCBI-GeneID:
107041037
NCBI-ProteinID:
XP_015116879
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MEKGGVEYWGRDDEEELLASCVNVLSIKSCKPGVAADEIDKVPTAAEEPLLKKLLHKTLV
ESKQEVEIQRRNPNSPLYSVKSFEELKLQPKLLMGIYDMGFMKPSKIQETALPTLLADPP
GNMIAQSQSGTGKTAAFTLAMLSRVDTTKPYPQVLCLSPTYELAIQIGEVAAKMSKHCPE
IKIKYAVRGEQMARGEKITDHIIIGTPGKALDWSLKFRFFNLDKINVFVLDEADVMIATQ
GHQDQCIRMHKMLPKTCQVMFFSATYEKEVMDFAEIIVDDPMIIRLKREEQCLDNIKQLY
VNCQDMEAKYDAITTIYTNLTGQAIIFCHTRRTATWLAEKMIDEGFTVGLLSGEMTVEER
IGVLDLFREGCVTVLVTTNVLARGIDVDQVSLVVNYDLPVDQQSNADHETYLHRIGRTGR
FGKKGVAVNLIDSPLAMAICNEMERHFGKKIELLDIKCRDLKARIRE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggaggcgtagaatactggggtagagacgatgaggaggagctattggcatcg
tgcgtaaacgtcttatcaattaagagctgcaaacctggagttgctgctgatgagattgac
aaggtcccgacagcagcagaagagcccctcctcaagaaactcctccacaaaactctcgtt
gagtctaaacaagaggtggaaattcaacggaggaacccaaactcacccctgtacagtgtg
aagtcgttcgaggagctgaaactccagccgaagcttctgatggggatctacgacatggga
ttcatgaagccctcgaagatccaggaaacggccctaccaactttgctagctgatccacca
gggaatatgatcgcccagtcccagtcaggcactgggaaaacagctgccttcacgctggcc
atgctgagcagggtcgacacgacgaaaccttatccccaggtgctctgtttgtcacctact
tatgagttggctatacagattggggaggtagccgccaagatgtcgaagcattgtcctgag
atcaagatcaagtatgctgtgaggggagaacagatggcaagaggtgagaagataaccgac
cacataatcatcggcacccctggcaaagccctggactggtccctcaaatttcgattcttc
aatctcgacaaaatcaatgtttttgtactcgacgaggcagacgtgatgattgccacacag
ggtcatcaggaccagtgcatcaggatgcacaagatgttgcccaagacctgtcaggtgatg
ttcttctcggcgacctacgaaaaagaagtgatggactttgctgagatcattgtcgatgat
cccatgatcatcagactcaagagggaggaacaatgtttggacaacatcaagcagttgtac
gtcaactgccaggacatggaggccaagtacgacgccataaccactatttatacgaatctc
acaggccaggccatcattttctgtcacacgaggagaactgccacgtggctggctgagaaa
atgatcgatgagggattcaccgtgggtttattatctggggagatgactgtggaggagcga
atcggagttcttgatctcttcagggagggctgcgtcacagttctggtgacaactaatgtg
ttagctcgaggcattgacgtggatcaggtatctctggtggttaattacgatctcccagtt
gatcagcagtccaatgcagaccacgagacgtacctccacaggatcggtagaacaggcaga
tttggaaagaaaggagtcgccgtaaacctcatcgactcccccctggcaatggctatctgc
aacgaaatggaacgacactttgggaagaaaatagaacttctcgacattaaatgtcgagac
ctcaaggctagaattcgcgagtaa
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