Diachasma alloeum: 107041475
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Entry
107041475 CDS
T07663
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
dam
Diachasma alloeum
Pathway
dam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107041475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107041475
03032 DNA replication proteins [BR:
dam03032
]
107041475
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
107041475
mRNA cycle factors
Common to processing body (P body) and stress granule
107041475
DNA replication proteins [BR:
dam03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
107041475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
TIMELESS
Motif
Other DBs
NCBI-GeneID:
107041475
NCBI-ProteinID:
XP_015117544
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MKRSYGNSGDKSNESLEATRRLYRGATDVAKRLDEQKSCALTATDIFTPSGEVLRAKLKD
YCERLILKDPVSHARKIDELLWRRGFYDIVAAAKKLRKGNVWSDAEKALLSTHLHVGVGF
YHHLILRLQQECGLDLSGVVDFAFPGRKDVIIIREKMPPAKLQSEEYRQCVMKIIHRSLI
CLGDLARYKLDLDPNWDPMIATRYYKMAIAIDPNIGMPHNQLGTLAGNRNYGIEAVYHYL
RCILCSEPFEGTEGNLKRVISTHIYYDKEKLPSQRCAARLFTLLQKWDNDSSSMERINED
CENLLTEMENCLTLEKPEPQSRNAPMKGDTIDEFLLNSKTDQCSQLTEDVVFKMVAICLM
SISKLQSKNSPHVQSIIAFILSLLSKLIQITIIHLQESIIETSLMNSEGVSLIISPETTE
KIENKDLNAVDLNDNTRQSSPTQKKQNGNVNGNPKKSRDKSKYLLRKLRRPRKRINSSDS
DGSDIDGPGIGSSSDELNSDISETEEEDELSQGQDDPSEDEIENDTLINENEESEAPIIE
INCHEKDLGDDKCLSDKNNPQVNEIAGENEKNISNGDAQPPDLAFVAQLKKQNLNPRDLL
GIFCKEELLQSIKICFDWIKSHPEIIKIISRSSRTLLHRIVVLSNLLMIDVDELIDLKKD
SGVLRDKSKFRGYVGVIPLPEDSDLKGLDVLKGSHENLDWRILRNFNVSRTEQVLLRTQK
IICFGEDLTRVEEAGVTFDETQKVFLLEDPKGPGVIEEEQRDSCKNQKQNGNEDQSRGKL
MRHMGKLWLKAEVRALESSLRSKLMSAYLVPDHEALAKFMPVLKRLMYAKKFIIVIPSVV
VQALDEMKRTSSQAREATRWLESQLRKGSRFLRAQRPHEHLALPYIKGPKPKDKEAWSFF
QIIECCHYLTQQSNVGFSAGSGSPVVTLLTGTSVEERKSSSFSSDGLAKTAGINLEHIES
FHTKWKTSSKSHG
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatcatacggtaactctggtgacaagagtaatgagagtctcgaggctacgaga
cgattgtacaggggagcaacagatgttgcgaagagactcgatgagcagaagagctgtgcc
ctgacagcgactgatatttttacaccatcgggcgaggttctcagggctaaattaaaggat
tattgcgaacgactgatcctgaaggatccggtgagccatgccaggaagattgacgagttg
ctttggcggagaggattttatgatatcgttgctgctgccaagaaacttagaaagggaaat
gtctggagtgatgcggaaaaagcactgctctctacccatcttcacgtgggcgttggattc
taccatcacttgatactcagattacaacaggaatgtgggctggatttatcgggcgtagtc
gactttgcatttcctgggaggaaagatgtcatcatcattagagaaaaaatgcctccagca
aagctgcaatcagaggaatatcgtcaatgtgtcatgaaaataattcacagaagtttgata
tgcctgggtgacctggctcgttacaaattagatctagaccccaactgggatcccatgatc
gccacgagatactacaaaatggcaatagcaatagacccaaacattggaatgccccacaat
cagctgggcacattggcaggcaacagaaactacggaatcgaggccgtttatcattacttg
agatgcattctctgttctgaacccttcgagggaactgagggcaacctcaagagagtcatt
tccactcatatttattatgacaaggaaaaattaccatctcaacgttgcgctgctagactg
tttacgttattgcagaagtgggataatgattcttcgagtatggaacggataaatgaagat
tgtgagaatctgctaaccgagatggaaaattgcttaaccctcgaaaaacctgagccccaa
tcccggaatgcaccgatgaaaggcgacacaatcgacgaattcctcctgaacagcaaaaca
gatcagtgctcccagctcaccgaagacgttgtcttcaaaatggttgcaatttgcctcatg
tcaatttccaaactccagtctaagaactcacctcacgtccagagcatcattgctttcatc
ctctccctcctatcaaaactgatccaaatcacgatcattcatctccaagagtccatcatc
gagacatcgttaatgaatagcgaaggtgtcagcctcataatttcccctgagaccaccgaa
aaaatcgagaataaagacctgaacgcagtcgatctcaacgacaatacgagacaatcatcc
ccaacccaaaagaaacaaaatggaaatgtcaatggaaacccgaagaaatcccgagacaaa
tctaaatatttgttgagaaaattacgaagacctagaaagagaatcaacagttcagactca
gatgggagtgacatcgacggtcctgggataggttcctccagtgatgaactaaattccgac
atctctgagactgaagaagaggacgagttgagccaggggcaggacgatccatcagaagac
gagattgaaaatgacactttaatcaatgaaaatgaagaatctgaagctccaattatcgag
ataaattgtcacgaaaaggacctaggggacgacaaatgtctgtcagataagaataatccc
caggtaaacgaaattgctggagaaaatgagaagaatatctccaatggagatgcccagccc
ccagatctggcattcgttgctcaactgaagaagcaaaacctcaaccccagggaccttttg
ggtatcttttgcaaagaggaattgctgcaatcgatcaagatctgcttcgactggatcaag
agtcatcctgagatcatcaaaattatatcgaggagctcgagaacacttttacacaggatt
gtggttctgtcgaatttattgatgattgatgttgatgaactgatcgatttgaagaaggac
tctggggttctgagggataaaagtaaatttcgaggatatgtgggggtgattccactgcct
gaggacagtgacctgaagggtctggacgtgctgaaaggttcacacgagaatttggactgg
aggattttgaggaatttcaatgtcagcaggactgagcaggtgctactgaggactcagaag
attatttgcttcggagaggatctgacgagggtggaggaggcaggggtgaccttcgatgag
acacaaaaagtcttcttgttggaggatcccaagggtccgggagtaatcgaggaggagcag
agggacagttgtaaaaatcagaagcagaatgggaatgaggatcagtccaggggcaagctg
atgaggcacatggggaaactgtggttgaaggcggaggttagggcactagagagcagtctc
aggtccaagctgatgtcagcgtatctggtgccggaccatgaggctcttgccaagttcatg
cccgtgctgaagcggctcatgtatgcgaagaagtttattattgtgatcccatctgttgtt
gttcaagcattggatgagatgaaacgaactagcagtcaagcgcgtgaagctactagatgg
ctagagtcccaactccgaaagggatccaggtttcttcgagctcagagaccccacgaacac
ttagccctaccttacatcaagggaccaaagcccaaggacaaagaggcctggtcattcttt
cagatcatcgagtgctgccactatctaacgcagcagagtaatgtgggattcagtgctgga
tctggatcacctgttgttacacttttgacagggactagtgtcgaagagagaaaatcatcg
agtttcagcagtgacggattggctaaaactgctggaataaatttggaacacatcgaatcc
ttccacacaaaatggaaaacatcaagcaaaagtcatggttga
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