Diachasma alloeum: 107041565
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Entry
107041565 CDS
T07663
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dam
Diachasma alloeum
Pathway
dam03013
Nucleocytoplasmic transport
dam03015
mRNA surveillance pathway
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107041565
09122 Translation
03013 Nucleocytoplasmic transport
107041565
03015 mRNA surveillance pathway
107041565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107041565
03041 Spliceosome [BR:
dam03041
]
107041565
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107041565
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107041565
Spliceosome [BR:
dam03041
]
Complex C
Other components
EJC/TREX
107041565
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107041565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107041565
NCBI-ProteinID:
XP_015117655
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEAVVDGSGDVPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPAVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRTK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaacgacgaccttttggattacgaggatgaggagcagactgaggcagttgtt
gatggaagtggtgatgttccagccaagaaagaagtcaagggaacctacgtatccattcac
agcagtggattcagggatttcttgctcaagcctgagattctaagggccatcgtcgactgc
ggtttcgaacatccctccgaagtacaacacgaatgcattccacaagcagtccttggcatg
gatatcctgtgccaggcaaagtctggtatgggtaaaacagcagttttcgtactggcgaca
ttgcaacagcttgaactcactgagaatcaggtctatgttcttgtcatgtgccacacacgt
gagctcgctttccaaatcagcaaggagtacgagagattctcaaaatacatgcctgcagtc
aaggtgggagtgttctttggtggtcttcccatccagaaagacgaagaagtattgaaaaac
acatgtccccacattgtcgttggtaccccaggtagaattctcgccctcgtgagaacaaag
aaactcaatctcaaacacctcaagcatttcatcctcgatgagtgtgacaaaatgctggaa
ttactggatatgaggagggacgtacaagaaatattccgttcgaccccccatggaaaacaa
gtcatgatgttcagcgcaaccttgtccaaggatattcgtccagtgtgcaagaaattcatg
caagatcctatggaagtctacgtggatgacgaagccaaactcacgcttcatggactgcag
cagcattacgttaagttgaaggagaatgagaagaataagaagttgtttgaacttctcgat
gtgttggagttcaatcaggtcgtcatcttcgtgaagtcagtccaacgatgcatggctctc
gcacaacttctcacagagcagaacttcccagccattggaatacacagaggaatgacccag
gaggagcgtctctccagatatcagcagttcaaagacttccaaaagagaattttggtggct
acgaatctgtttggtcgcggcatggacatcgagagagtcaacattgtcttcaattatgac
atgccagaggattcagatacttatctgcacagggtagcacgtgctggacgttttggaacc
aaaggtcttgcaattacactggtcagcgatgagagtgacgcaaagatcttgaacgatgtt
caggaacgattcgacgtgaatatcacagagttacctgatgaaattgacttggcctcgtac
attgaaggccgataa
DBGET
integrated database retrieval system
