Diachasma alloeum: 107041828
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Entry
107041828 CDS
T07663
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
dam
Diachasma alloeum
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dam03009
]
107041828
Ribosome biogenesis [BR:
dam03009
]
Eukaryotic type
90S particles
Other 90S particles
107041828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
S1_RRP5
HAT_PRP39_N
S1
TPR_14
Suf
HAT_PRP39_C
TPR_19
ARM_TT21_N
ARM_TT21
HAT_Syf1_M
TPR_CcmH_CycH
TPR_12
ARM_TT21_5th
TPR_16
S1_2
DUF7287
NrS1-1_pol-like_head
Motif
Other DBs
NCBI-GeneID:
107041828
NCBI-ProteinID:
XP_015118084
LinkDB
All DBs
Position
Unknown
AA seq
1425 aa
AA seq
DB search
MVSRNFPRGGKKPSKKNVTNYLFHRTSNPKPNADGFGGERVELNTEIVARTAQCLTYTTL
SQGMTLLGRVHNSTQYDVTISLPGRLSGFLPVTNISEAYTNLLQNIVSSKAHPADFRPLS
ELYKRGDYVVCCVKTINTQSKHRVILSVEPEMINQNLDVGKLRQGSKIACSVSSVEDHGY
AVHTGVQNLRGFLETNYVKDGVKYYPGQQIFCAVRSATTAESITTVKLSTKPTHLNAPSL
SKAQHVDTLIPGTKFLLTIGKILPDGLQVTFNTDNIGYINRLYLQKPLDTYEQGSELHAT
FLYTLPIVKFSYFTEMPLEPELEIVKCGEIEKARVIFQDARGIVLRLEKNIRGFLPFKRT
GVDFQRISEKFTPNSTHTCRILTYDNFDRVYVCSTLKHELTSENKIPETVTLGDVMEVKI
IRQNRENKFLFVKSGRILGDVAPEQIHDIDDAVVPLISEKLLARVLSRDKKGERFNFTLK
KSLVYSHLPILSEFAEAQVGSTYLATIIRKSGQGLLVKFYGDLKGVIPVKSLQNIRGGIK
AFRQGQVVHVKVANIIVQEHRLILELCAEDEEWKISPFEIGATVEGKVMDSSVEGVHVRI
PHPSGKGTITAYLPAGHMSPCQEMGKRMAVLSVPGDTISARVFSTTPEFVLTKTLIPQEW
YIDIKNLSIGDCIPCSITQIHTTGIKVLLPVKNLKCYGIVALNKIDHITMLFKHQILFGK
ITQINKKTQVIHLTTSLHEVWSSAVENDTDVITSVDVLALYLSKLKELSLQSYYNTKTIS
KMKLGQKVSGVVEKISENGVIIKLNNGIPATVRKGHFKKSLKVGDEVNGSVLWMNYIDEL
VEITLNPIWIHAIKPKQNKILEDGFRKRLKGEIVLVDKWFVLAVVKGCGKGSLVALPTKA
HVNDLTPDLSNYRIGATIKCYVILKDDESEIVPIVYRETAFVTTKQLNDKKMNSAVKIED
ITKPNDQGSESQTLKRNREADDVLDETRQSKVTKKLEDTLMPKFFDYKSEETKQKRKPQH
SQSQDEELEVIVPKEEEQHRAKLICASSNESEAMGKVAVIREAIEDSGLKIQNKKYAEVE
ELSIPECGFFWDSKPDTALCLKKESSGDERAFEELPTRKKRKISAMERREFERQKETEIR
EKEEELASNQVPNSVEQFNRLILASPDSSFVWLQYMAYHLQSTEIEKARAVAAQALKTIN
FRQENEKLNIWQGWLNLESRFGTPETLNKIFLEAIKANDSQKIYLHMLKIHSDAGRTAEI
ERTVKTITGKFKSLPEVWVQCGAVLLKSGLTEKSRQTMQRALQSLPAADHVYLTVKFAQL
ENKFGDNERAETLFEKILSSYPKRVDVWSIYVDVLIKSKRYDSARRILEHAVNQILPPKK
MKALFEKYVTFEEQYGTTETLSHTRKLARKYVENYGSGGNLEFNH
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcacgcaattttccacgaggtggtaaaaaaccttcgaagaaaaatgtaacaaat
tacttatttcatcgaacgtcaaacccgaagcctaatgcagacggatttggaggtgaacgt
gtagaattgaataccgaaatcgttgcaaggactgcacaatgtttaacgtacacaactctc
tcacaaggaatgactcttctcggtcgagtgcacaattctacccagtacgatgtcaccatt
tctctcccagggcgattgagtggatttttaccagtcacgaatatcagtgaagcctacaca
aaccttctccagaatatagtctcctcaaaagctcacccagcagacttcagacctctgtcg
gagctttacaaacgaggagactatgtagtttgctgtgtaaaaactatcaatacacagagt
aaacatcgagttattctttcggttgaacctgaaatgattaatcaaaatttggatgttggc
aaattgaggcaaggatccaaaattgcgtgttctgttagtagtgttgaagatcatggctat
gccgtgcatactggcgttcagaatcttcgcggatttttggaaaccaattatgtcaaagac
ggagttaaatactatccggggcaacagattttctgcgcagttcgctcagcaaccaccgcc
gagagtataacaacagtgaaactatcaacaaaacccacacacttgaatgcaccctcatta
tccaaagctcagcacgtagataccctgatccctggaacaaaatttctactgacaattgga
aaaattctccctgacggacttcaggttaccttcaatactgataacattggctatataaac
cggctgtatctccagaaacccttagacacgtacgaacagggttcagagcttcacgcaaca
tttctctacactctccccatcgtgaaattttcatacttcaccgaaatgcctctagaacca
gaactcgaaattgtcaaatgtggggaaatcgaaaaagcacgagttatttttcaagacgcg
agaggaattgtcctgcgacttgaaaagaacattcgtggatttctccctttcaagcgtacg
ggggttgacttccagagaatttctgaaaaattcactccgaactctacccacacatgtaga
atattaacgtacgataattttgatcgagtctacgtctgttcaactctgaagcacgaactt
acctccgagaacaagatcccagagacagtgactctgggtgacgttatggaagtgaaaatt
atccgtcaaaaccgagaaaacaaatttcttttcgtaaaatcaggaagaatcctaggagat
gtagctccggagcagattcatgacatcgatgatgcagttgtccccttaatcagcgaaaaa
ctattagcgagagtcctttcaagagacaaaaaaggagaacgtttcaatttcacattgaaa
aagtcattagtatacagtcatcttccaattctatcagaattcgctgaagctcaagttggt
tccacatatttagcaacaatcatccgtaaaagtggacaaggactattggttaaattctac
ggtgatctaaaaggtgtaattcctgtaaaatcattacaaaacattcgtgggggaattaaa
gcattcagacagggccaagtggtgcatgtgaaggtcgcaaacatcatcgtccaggaacat
aggttaatcctcgagctctgtgcagaagatgaagaatggaagataagtccttttgagatc
ggtgcgacagtagaggggaaagtcatggactcttcagttgaaggagtccatgttcgcatt
cctcacccctctggaaaaggtaccatcacagcatacttgccagcaggacacatgtcgcct
tgtcaagaaatgggaaaacgcatggctgttctttcagttcccggagatactatttcagct
cgagtcttctccacaactccggaatttgtgttaacgaaaacattgatccctcaagagtgg
tatatagatataaaaaacttatccattggtgactgcattccctgttccatcacgcaaatc
cacacaacaggaattaaagttttgttgccggtgaagaacttaaaatgctacggaattgta
gcgctgaataaaatagaccatataacaatgctatttaaacaccaaatattgtttggaaag
atcactcaaatcaataaaaaaactcaggtcattcatctgacaacgagtctccatgaagtc
tggtcgtctgctgtagaaaatgacaccgatgtcattacttctgttgatgttctggcttta
tatctttcgaagttgaaggagttatccttacagagttattataatacaaagacaatctcg
aaaatgaaactaggacaaaaagtctctggagttgttgagaaaataagtgaaaatggagtc
attattaagttaaataacggtattccggcaactgtgcggaaaggtcattttaaaaaatca
ctgaaagttggtgatgaagtgaatggatctgttctatggatgaattacattgatgaactt
gtcgagattaccttgaatccaatttggattcatgccatcaaacctaagcagaataaaatc
cttgaagatggttttagaaaaaggttgaaaggagaaattgttttggtagataagtggttt
gttcttgctgttgtgaagggctgcggtaaggggagtctcgtggcattacctactaaagcc
catgtgaacgatctgacacctgatctatcaaattatagaattggagctacgatcaagtgt
tatgttatcctgaaggatgatgaatcagaaattgttccgattgtttatagagagactgcg
tttgttacgacaaaacaattaaatgataagaaaatgaattctgcggtgaagatagaagat
atcacaaaacctaacgatcaaggctccgaaagtcaaacgctgaaaaggaatagagaagca
gatgacgttctagatgaaaccagacaatctaaagttactaagaaacttgaagatacttta
atgccaaaattctttgattataaatctgaagagaccaaacaaaaacgaaaaccacaacat
tcacagtcacaagatgaagaacttgaagtgattgtaccaaaagaggaagaacaacataga
gcaaaactcatctgtgctagctcaaacgaatcagaggctatgggaaaagtcgcagtgatt
cgtgaagcaattgaagactcagggttaaaaattcaaaataaaaaatatgcagaagtagaa
gaattgagtattccagaatgtggatttttctgggactcaaaaccagacactgccctgtgt
ctcaaaaaggagtccagtggtgacgaaagagcatttgaagaactgcccaccagaaaaaaa
agaaaaatatctgccatggagcgaagagaattcgagcgtcagaaggaaacagaaatcaga
gagaaagaagaagaactagctagcaatcaagttcccaattcagtggagcagttcaatagg
cttatactggctagtcctgacagttccttcgtgtggttgcaatacatggcataccacctt
caaagtacagagatagaaaaagcgagagctgtagctgcacaggccctcaagactatcaat
ttcaggcaggaaaatgagaagctaaacatctggcagggttggttgaatctcgagtcaaga
tttggtaccccagagaccttgaacaaaatcttcctggaagctatcaaagccaacgactct
caaaagatctatcttcatatgttgaagatccattcagatgctgggagaactgctgaaatc
gaaagaacggtgaaaaccatcacgggaaagtttaagagcctcccagaggtttgggtgcaa
tgtggagctgtactattaaagtcgggattgactgaaaaatcaaggcaaaccatgcagagg
gctctccagtccctccctgcagccgatcatgtgtatctcacggtgaagttcgcacagttg
gagaataaatttggggataatgaaagagctgagacacttttcgaaaaaatattatcatct
tatccgaaaagagttgacgtctggtctatttacgttgatgttttaattaaatcaaagcgt
tatgattctgcacggagaatcctagaacacgctgttaatcaaatactgcccccaaagaag
atgaaagcgttatttgagaagtatgttacttttgaggaacaatatggaactacagaaact
ctctcacatacacgcaaacttgccaggaaatacgtggagaattacggcagtgggggcaac
cttgaatttaatcactga
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integrated database retrieval system
