Diachasma alloeum: 107043006
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Entry
107043006 CDS
T07663
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
dam
Diachasma alloeum
Pathway
dam03030
DNA replication
dam03410
Base excision repair
dam03420
Nucleotide excision repair
dam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107043006
03410 Base excision repair
107043006
03420 Nucleotide excision repair
107043006
03430 Mismatch repair
107043006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dam03032
]
107043006
03400 DNA repair and recombination proteins [BR:
dam03400
]
107043006
DNA replication proteins [BR:
dam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107043006
DNA repair and recombination proteins [BR:
dam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107043006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
RuvB_N
AAA_14
BRCT_2
AAA_30
AAA_17
AAA_6
AAA_16
AAA_33
PTCB-BRCT
NTPase_1
RNA_helicase
AAA_19
AAA_5
AAA_18
nSTAND3
AAA_7
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
107043006
NCBI-ProteinID:
XP_015119781
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MSKDIRCYFTKSPRGQTSKNDAKPRNVKKRAVISSDEEDDIKIADCKKNEKSIKKMLIRK
QILSDSEDDSAVTSKKNSSSSIKKIDKEEEREIKRVDISTMLGKTPVKRVNVPKKESLPD
NENKKKSDLQYNDDDDEDVDFEESLNKLDIKAIEANYYKEGIQENNTSGKRKKDPNSEDD
DTSTKKPKLQKNAADGGDDHLKEEKAQNSRMKNVSPKISPNNATKSHESNSSKKLKFHNV
KAVGSKITSTSNIEINREEKKIKKKAASEEEEVTFLEERAMKKKQSSVLYQAYLARGGAR
NPGSKPIPEGAPNCLAGLSFVLTGVFESLEREEASDLIKKYGGRVTAGISKKINYIVVGE
EAGQSKLAKAIALKIKQISEDELLDLIRKKPPGNSRDIIHNKERKKDKSPEYSKVSPEKC
PSSPKSKSISPKQPQEELKIMEDSKYFSNAEALVEKYRPTTMKQIIGQHGESSNAKKLYN
WLLNWHKNRSSNVKHTKPSLYAKNDNGGYYKACLLSGPPGVGKTTSVQVVCKELGFDLLE
FNASDTRSKKLLKDEVSGLLSNTTMKGYFTGNAEEKPSCKHVLLMDEVDGMAGNEDRGGL
QELIALIKSTDIPIVCICNDRNNPKMRTLANYVFDLRFQKPRVEQIRGAMKSLCCKENIK
ISNEDLNRLIEATNQDIRQVINHLAMLIGDTDSIIKENQSDKSSKLNKDLKLGPWEVVRK
VFNAEDHKSMTIHDKSDLFFHDYNIAGLFVQENYLSVIPKAPNNQLLDIVAASADSLSLG
DQVEKAIRSQMAWSLLPMQACYSSVIPGTLMSGRIASQINFPTWLGKNSRRNKFDRLLQE
ITAHTRLVTGASKEAINMDYLKSLRNAITMPLVVEGAEGVEHSLEIMNHYHLLREDLDSI
IEISLWPGDHDPMQSIESKVKAAFTRAYNKHSAPVPFVVKAIVSKKKGQATQDDGFIDDD
EDNDNDDDANINEDSDAENNSLDVDKMIKAKKPITSKAIASTSKSQMKPASKRGRGRGK
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggatatcagatgttattttacgaaatctcccagaggacaaacctcgaaaaat
gatgccaaaccaagaaatgtgaaaaaacgagcagtgatatcatccgatgaggaggatgat
ataaaaattgctgattgcaaaaaaaatgaaaaatctatcaagaagatgttaattaggaaa
cagattctctccgattcagaagatgacagtgctgtaacgagtaagaaaaattcttcatca
agtattaaaaagatagacaaggaggaggagcgtgaaataaaaagagtcgatattagtact
atgcttggaaaaactccagtgaaaagagtcaatgttcctaaaaaagaatcactcccagat
aatgagaataagaaaaagtcagatttacaatataatgatgatgatgatgaagatgtggat
tttgaggaatctttgaataaattggacattaaagcaatcgaagcaaattattataaagaa
ggaatccaggaaaataatacaagtggcaagaggaagaaggatcctaatagtgaggatgat
gatacaagtacgaaaaagcccaaactccaaaaaaatgctgctgatggtggtgatgatcat
cttaaagaggagaaagctcaaaatagtagaatgaaaaatgtttcacccaaaataagcccc
aataatgcaaccaaaagtcatgagagtaattcatccaagaaactcaagtttcataatgtg
aaggcagtaggttcgaaaataactagtacttcaaatattgaaataaatcgtgaggagaaa
aaaataaagaaaaaggccgcctcggaagaggaagaagtgacttttttggaggaacgagca
atgaagaagaagcaatcatcagtattgtatcaagcttatcttgcaagaggtggggcaaga
aatcctggctcaaaaccaattccagaaggagcgccaaattgtttggcaggtttgagtttc
gtgcttactggtgtgtttgaatcattggaaagagaagaagctagtgatttaataaaaaag
tatggtggacgtgtgacagcgggaatttccaagaaaattaattacatcgtggtgggtgaa
gaggccggccaatccaaactagcaaaagcaatagcactgaaaattaaacaaatatcagag
gatgaattactcgatctaattcgtaaaaaacctcctggtaattctcgcgatataattcac
aacaaagaaagaaagaaagataagtcaccagagtacagtaaagtttctccagaaaaatgt
ccctcttcacccaaatccaaaagtatttcacccaagcaacctcaagaagaattgaaaata
atggaagattcaaaatactttagtaatgcagaggcccttgttgaaaagtatcgaccaaca
acaatgaagcaaataataggccaacacggagagagtagtaatgctaaaaagttgtacaat
tggttattaaattggcataagaatcgttctagcaatgttaaacatacaaaaccatcatta
tacgctaaaaatgataacggtggttattacaaggcttgccttttgtcagggccaccaggt
gttggaaaaacaacaagtgtacaagttgtttgcaaggaattgggctttgacttattggaa
tttaatgcttcagatactcgaagtaaaaaattattgaaagacgaagtatctggattgctt
tccaatacaacgatgaagggatatttcactggtaatgccgaggagaaacctagctgcaag
cacgttcttctcatggacgaggtcgatggaatggcgggtaatgaggatcgtggtggcctt
caagaattaattgctctgattaaatcaacagatattccaattgtatgcatttgcaatgac
agaaataatccaaaaatgagaactttggccaattatgtttttgacttgcgatttcaaaag
cctagagtcgagcaaataagaggtgccatgaagtctctatgttgcaaagaaaatattaaa
atatcaaatgaggatttaaatcgactgattgaagccacaaatcaagatatacgacaagtg
atcaatcatcttgccatgctgattggagatacagatagtattattaaggaaaatcaatct
gacaaatcatccaagttgaataaagatcttaagctcggaccttgggaagtggtaagaaag
gttttcaacgctgaagaccacaagagcatgacaattcacgataaaagtgatctttttttt
cacgattacaatattgctggtctatttgttcaagaaaactacttatctgtcattccaaaa
gcaccaaacaaccaactattggatatagtagcagcaagtgcagactctttgtccctaggt
gatcaagtggaaaaagcaattcgttcacaaatggcttggtctcttttacccatgcaggca
tgctattcttctgttatacctggtactctaatgtctggccgcattgcaagtcaaattaat
tttccaacttggcttggcaaaaattctaggcgcaataaatttgacagactacttcaagaa
attacagctcatacgcgattagttacgggtgctagtaaagaagctatcaatatggattat
ttgaaatctctgaggaatgccattaccatgccactagttgttgaaggcgctgagggtgtt
gagcactcattggaaattatgaatcactatcatctattgagagaggatttagattcaata
attgagatttctttgtggcctggagatcatgatcctatgcagtcgattgaatctaaagtt
aaagctgcttttacacgggcttacaataagcattcagcaccagtaccatttgttgttaaa
gcaattgtatctaagaaaaaaggccaagctactcaggacgacggatttattgatgatgat
gaggataatgataatgatgatgatgccaatatcaatgaggactctgatgcagaaaacaat
agtctcgatgttgataaaatgatcaaggctaaaaaaccaattacaagtaaggccattgcg
tccacgagcaagagtcagatgaaaccagcgagtaaacgaggccgaggacgtggaaaataa
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