Diachasma alloeum: 107043251
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Entry
107043251 CDS
T07663
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
dam
Diachasma alloeum
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107043251
Spliceosome [BR:
dam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107043251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
ARM_TT21_5th
TPR_6
TPR_16
TPR_CcmH_CycH
NRDE-2
TPR_TmcB
TPR_11
PPTA
HAT
Motif
Other DBs
NCBI-GeneID:
107043251
NCBI-ProteinID:
XP_015120136
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MSSLSGDENQIEENEPVRRTRSGRALKAPVATPKKTPAKKAIRGRNTRRGAQEIDTTDET
STTILEETDDNSETGENGMQQLGEIMVEQFEEETPVLQLQLEEPQTTDSAQYAQMDQETQ
GVPELEAPPPPVVSTNTPTAPILSTLKTKETPQVVEDTEDKVITLEDNSLEQMLQTEEDN
PVDEAINGGNTDSNQIMDFGDVMDTIVSAEIPLLNDEPGNEETKAIVTTMEIDDPVQQIA
DAVDDIVDESFEKIVAEETKEAEVEKKIEETAIEKGEGVDVGEGEGQVEGEVEKIEPDTE
AVSEDEFPTEAPAKEPETEAVSDEELPVAPPADLGETESVSEDELPPDSEKKRKAAKTAA
KTAERKVKADVRAKRKLNAEGEYDPSSPTSETNDETPAKKVALAVDVEAGEKPEAKPASP
KKKTLPELDKYWKAVNEDPSDFTGWTYLLQYVDQENDAEAAREAYEKFLERYPYCYGYWR
KYADYEKKKGNPDNVQKVFDEGLNAISLSVDLWLHYINHCKSVHEKDEGKMREQYERAIQ
ACGLEFRSDRLWESYIKWEQEGKRLSRVTALYDRLLSTPTFGYMTHFQTFQEFVSANSPQ
RILTVDDFLAIRAEVKALLKSEETPGATPADDVPPGEEPAAHEVPPTDEETRVIREKIIS
TRRKMHKANVNAVAARWTYEEGIKRPYFHVKPLERCQLKNWKEYLDFEIEQKDQARIIIL
FERCLIACALYDEFWLRFVRYLESLTGDNAEKIRDVYSRACTVHHPKKPNLHLQWATFEE
GQSNFDKAAEILENIDNVMPNMLQVAYRRINLERRRGDLDKSCVLYESYITNSKNRTIAN
NIAVKYARFLCKFRNDIDKAVKVLLKATDKDKDNPRLYLQLIDLGLQRNPVDTQEVVGYM
DLFIEREHADLEQRVLFAQRKVEFLEDFSTDIKQVLKAHEQFQKCIKQAKERKKSKSEDS
KVDSSPPKKGKTSDTSSVPPPPTASSQSSYQYSSSASGPYQSQQQFQSGQYGNQSGYQQS
YQQYPPPSDPNYANYQNWQYGQSGPQPYGSYNQWGSYNYY
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgttgagtggcgatgagaatcaaatcgaggagaacgagccagtaagaagaacg
agatctggacgcgcactcaaggcaccagttgccacaccgaaaaagacacccgccaagaaa
gctattaggggtagaaataccaggcgaggggctcaggaaattgacacaactgatgagact
agtacaacaatattagaagagactgacgacaacagtgagacaggtgagaatggtatgcaa
caattaggtgaaataatggttgaacaatttgaggaagagaccccagtgttgcaactacag
ttggaggagccccagacaacggatagcgctcagtatgcccagatggatcaagagacccaa
ggagtgcctgaactagaagccccaccaccaccagttgtgagtacaaatacccccacagca
ccaattctatccaccctgaagaccaaggagactccccaggttgtggaggacactgaggac
aaagtgatcactctggaggacaacagtttagagcaaatgctccagacagaggaggataat
cctgtggatgaggccatcaacggtggaaacactgattccaatcagattatggactttggg
gatgtcatggacacgattgtttcagcagaaattccactgttgaatgatgaacctgggaat
gaagagactaaggcaatcgttaccaccatggagatcgatgacccagtacaacagattgct
gatgctgttgatgacattgttgatgagtcatttgaaaaaattgttgcggaggagacgaag
gaggctgaggttgagaagaaaattgaggaaactgcaattgagaagggggagggggttgac
gttggtgagggcgaggggcaggttgaaggagaggtggagaagattgagcctgatactgaa
gctgtctctgaggacgagttccctactgaggcgcctgctaaggagcctgagaccgaggca
gtgtcagacgaagaactgccagtggcacctccagcagacctgggcgaaactgaatctgtc
tctgaggatgagcttcccccagacagcgagaagaaacgaaaggcagccaagacagctgcc
aaaacagctgagagaaaagtcaaggctgacgttcgggccaagcgtaaattaaatgcagag
ggggagtatgaccccagttcaccaacgtctgagactaatgatgagacaccagcgaaaaaa
gttgcacttgctgtggatgtagaggctggggaaaaaccagaggccaagccagcatcgccc
aagaagaaaacattgccagaacttgataaatactggaaggctgttaatgaggatccatcg
gacttcactgggtggacatatctcttgcaatatgttgatcaagaaaatgatgcagaagca
gcgcgtgaagcatacgagaaatttctcgagcgttatccctattgctacggttactggcgg
aaatacgccgattacgagaagaagaaaggaaatccggacaatgtacaaaaggtattcgat
gaaggattgaatgctatttcgctcagtgtcgacttgtggctacattacatcaatcattgt
aagagtgttcatgagaaggatgagggcaagatgagggagcagtatgagagggctattcag
gcttgtggtttggaatttagatccgatcgcctctgggaaagctacataaaatgggagcaa
gagggaaagcgtctgagtcgagtaacagccctctacgaccgcctcctgtcaaccccaacc
ttcggctacatgacgcatttccaaacgttccaagagtttgtctcggcaaattccccccag
cggatcctcaccgtcgacgattttctggcaattcgtgctgaagtcaaagccctcttgaaa
tccgaggagaccccaggagcaactcctgcagacgacgtgcccccaggggaggagcccgca
gcccacgaggtgccaccaacagacgaggaaacccgagtcattcgagagaagatcatcagc
acaagacgcaaaatgcacaaggccaatgtcaacgccgttgctgccagatggacctacgaa
gagggaattaaacgtccttacttccacgtgaaacccctcgagagatgtcaactgaagaac
tggaaggagtacctggactttgaaatcgagcagaaggaccaggccagaataataattctg
ttcgaacgatgtctgatagcttgtgctttgtacgacgagttctggttgagattcgtgagg
tacttggagtcactcactggcgacaatgccgagaaaattcgagatgtctactcgagagcc
tgcacagtccatcacccgaaaaagcctaatcttcatttgcaatgggcgaccttcgaggag
ggacagagcaactttgataaagccgctgagatcctcgagaacattgacaacgtcatgccc
aacatgctccaggtcgcttacagaagaattaatctggagagacgaaggggggatctggat
aaatcctgtgttctctacgagagctacataaccaacagcaagaatcgaacaattgcgaat
aatattgctgtcaagtacgcgaggttcctctgtaaattcaggaatgacattgataaggct
gtcaaggtgcttctgaaggcgaccgacaaggacaaggataatcccaggctgtatctccag
ttgattgatctgggactccagaggaaccctgtggatacacaggaggtcgtggggtacatg
gatttgtttattgagagagagcatgctgatctcgagcagagggtgttgtttgctcagagg
aaggtggagttcttggaggacttcagtacggatatcaaacaggtgctaaaggcgcatgaa
cagttccagaagtgcatcaagcaggcgaaggagaggaagaagtcgaagagtgaggacagt
aaagtagattcatcaccaccgaagaaaggaaaaacatcagatacctcgagtgttcctccc
ccacctacagcgagttcccaatcgagctaccagtacagcagttcagcgagtggtccctac
cagtcacaacagcaattccaaagtggccagtatggaaaccaaagtggataccaacagagc
taccagcagtatcccccaccatcggatcccaactacgctaattaccagaactggcagtat
ggacagagtggaccacagccatatggatcgtacaaccaatggggatcgtacaattactac
taa
DBGET
integrated database retrieval system
