Diachasma alloeum: 107043502
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Entry
107043502 CDS
T07663
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
dam
Diachasma alloeum
Pathway
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107043502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107043502
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107043502
Spliceosome [BR:
dam03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
107043502
Complex B
107043502
Complex C
U2 SnRNP specific factors
107043502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
MscL
Motif
Other DBs
NCBI-GeneID:
107043502
NCBI-ProteinID:
XP_015120524
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MSYHRGGGNKPKGFGFTGFQMSGTKRTGANIPPPSTNPSLSKQGYHTMNSITENALSACW
GMPKKRSKTEEEYFEDDDEAQTSTLEYIPAPGSPTFDRMQKEQRKQADSDSEEDPLDAFM
AGIDAEVKKNNTKAALAEEELKEDKSKGFRQDIDGEDDEESYYRYMEENPTAGLTQEESD
QEIEYDDDGNPIAPAKKKEIDPLPPIDHSEIKYEAFEKNFYNVHEEIANLTKAQVEELRK
TLGIRVSGPSVPKPVASFGHFGFDDALIKSIRKSEYTQPTPIQSQAIPAALSGRDLIGIA
KTGSGKTAAFIWPMLVHIMDQKELQEGDGPIGLILAPTRELSQQIFHEAKKFGKVYNIQV
CCCYGGGSKWEQSQALQAGAEIVVATPGRMIDLVKMKATSLSRVTFLVLDEADRMFDMGF
EPQVRSICNHVRPDRQTLLFSATFKKKVEKLARDVLTDPVRIVHGDVGEANTDVTQHVIV
FNNNPTGKWIWLLQNIVEFLSSGSLLIFVTKKLNAEELANNLKLKEFEVMLLHGDMDQIE
RNKVITAFKRKEVSILVATDVAARGLDIPHIRTVVNYDIARDIDTHTHRVGRTGRAGEKG
TAYTLVTEKDKEFSGHLVRNLEGANQEVPKSLMDLAMQSSWFRKSRFKGGKGKSLNVGGA
GLGFRGRPEASAPKSGSSVQPPKDISEVVKKLERQGPGSDRLSAMKAAFRSQYTSQFRAS
SDHTWEQTITPPSLIMPPPPPPSTSGAAEGYPGGDGSIPQDTSNSSQGGSERKRVRKSRW
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccaccgaggtggtgggaataagccaaagggctttggcttcactggcttccag
atgtcagggacaaagaggactggagccaacatcccacccccatcgacaaatccctcattg
agcaagcagggatatcatactatgaattccatcactgagaatgcactctctgcatgctgg
ggcatgccaaagaaacgaagcaagactgaagaagaatatttcgaagacgacgacgaagct
cagacatcgaccttggagtacattccagccccaggctccccaaccttcgatcgaatgcaa
aaagagcagaggaaacaagcagacagtgacagcgaggaggatccacttgacgcattcatg
gctggtatcgatgcagaagtaaaaaagaacaatactaaagcagcactagctgaggaggag
ctcaaagaggacaaatccaaaggattcaggcaagatattgacggagaggatgacgaggag
agctattacaggtacatggaggagaacccaacagctggtttgacccaagaagagtccgac
caggagattgagtatgacgatgatgggaatccaatagccccagccaagaagaaggaaatt
gacccactgccccccatagaccacagtgagataaagtacgaagcattcgagaagaatttt
tacaatgttcacgaggaaatcgctaatttgacgaaagctcaggtcgaggagttgaggaag
accctggggataagggtatcggggccctcagtgcccaaaccagtcgccagtttcgggcat
tttgggttcgatgatgctctcatcaaatcaattcgcaagagtgaatacacacagccaact
ccaatccaatcacaggcgattcctgctgcactcagtgggagggatttaatcggcattgcc
aagacaggaagtggaaagactgctgcattcatctggcctatgctggtgcacattatggat
cagaaggagctgcaggagggggatggacccattggcttgatccttgcacccacgagggaa
ttgtcacaacagatcttccatgaggctaagaaatttggcaaggtctataatattcaggtt
tgctgctgctatgggggcggcagcaagtgggagcagagtcaggcacttcaagcgggggcg
gaaattgtcgttgccactcctggcaggatgattgacttggtgaagatgaaggctactagt
ctgagccgagtcacgttcttggttcttgatgaggctgataggatgtttgacatggggttc
gaaccgcaggttcgatcaatctgcaatcacgtgcgtcccgacaggcaaactctcctcttc
agtgcgacattcaagaagaaagtcgagaaactagcacgagatgttctaacagatccagtg
agaatagtccacggagacgtcggagaggcgaataccgatgtgacccaacacgtgatagta
tttaacaataatccgactggaaaatggatctggttgctccagaatatcgtggaattcttg
agttcgggtagtttactgatattcgtcacaaagaaattgaatgctgaagagttggcgaat
aatctgaagctgaaggagttcgaggtgatgctgttgcacggtgacatggaccagatcgaa
cgaaataaagtgataacagctttcaaacgaaaggaagtgagcattctggtggccacagat
gtggcagctagaggtctcgatattccccatatcaggacagttgttaattatgatattgcg
agggatattgatacgcatacgcatagagttggtaggacaggtcgagctggtgagaaggga
acagcttataccctcgtcactgagaaggataaggagttctcggggcatttagtgaggaat
cttgagggggctaaccaggaggtaccaaagagtctaatggatctggctatgcagagctcg
tggttcaggaagtccaggtttaaggggggaaagggaaagagtttgaatgtcggtggggct
ggactgggtttcagaggacgacctgaggcgtctgccccgaagagtgggtcgtctgtacag
ccgcccaaggacatcagcgaggtggtgaaaaaattggagagacaggggccggggagtgat
cgtctttctgccatgaaagcagctttcagaagtcaatacacgtcacagttcagggcgtct
tcggatcacacttgggagcagacgatcactcctccctcgcttattatgccaccaccacct
ccaccatcaacgtcaggcgctgcagaaggttatcctggtggtgatggatccatccctcaa
gatacttcaaattccagtcaaggtggctcagaacggaagcgagtgagaaagagccggtgg
gagtaa
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