Diachasma alloeum: 107043893
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Entry
107043893 CDS
T07663
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
dam
Diachasma alloeum
Pathway
dam03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107043893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dam03021
]
107043893
03019 Messenger RNA biogenesis [BR:
dam03019
]
107043893
Transcription machinery [BR:
dam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107043893
RNA polymerase I system
107043893
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
107043893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW6_SPT5
KOW
KOW2_Spt5
KOW7_SPT5
KOW5_SPT5
Spt5-NGN
KOWx_SPT5
Spt5_N
CTD
KOW1_SPT5
GPKOW_C
SH3_KIN17_C
Motif
Other DBs
NCBI-GeneID:
107043893
NCBI-ProteinID:
XP_015121055
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MSDSEESNYSGSERGGRSGSGSVRSAAGSGRSVSRSRSRSRSRSRSRSMRSRSGSGSERG
RGDEAVEARSDEEVEPEEEPEGEDLDSEEDEEEEEDRPKKKKKKDRFCGFIDDEAEVDDD
VEDDDEWEDGAQEMGIVGNEVDEVGPTAREIEGRRRGTNLWDSHREDEIEEYLKKKYAGE
CGATRHFGDGGEDMGDEITQQTLLPGVKDPNLWMVKCRIGEEKATVLLLMRKFLTYQFAK
DPLQIKSVVAPEGVKGYIYVEAYKQPHVKAAIQNVGNLRMGIWKQQMVPIKEMTDVLRVV
KEQTGLRVKQWVRLKRGLYKDDIAQVDNIDDLKHNQVTLKLLPRIDYTKPRGALRTAQSE
SDALKRKKGRRPAAKLFDPGAIRAIGGDITSDGDFLMFEGNPYSPKGFLYKKFLINAIVT
EGVKPTLSELEKFEEAPEGVDLELDRSDGSRKKDMASTHSFSTGDNVEVCEGELMNLQGK
IVSIDGNMIMVLPKHEELNDPLEFQSNELRKYFKMGDHVRVIAGRYEGDTGLILRVEQNL
VVLFSDLSNHELEVLPRDLQLSPDVATGVDRLGQFQWGDLVDVDKQTVGMIVRLERENFH
VLQNDGKVVQKRPQELTKRRENRNTFALDHQQNEIRKRDIVKIIDGPHTGRDGEIKHLYR
SFAFVYSRLYVDNGGIYVCKTRYLQLAGGAKSNSSSGSGLGFMSPRISSPMHPSGGGGRG
GGGRGRGRGGGGPGVRRERDLIGTTIKITGGPYKGNVGIVKDATDSTVRVELHSTCQTIS
VDRSHIAKVGVPTKDGSFSSYTRTPAYSSGGQTPMYGSKTPMHGSQTPMYENGSRTPHYG
SMTPSHDGSRTPGQSGAWDPTVTNTPARSNDFDAYSLEDGGSPGYGYPSTGEPFTPQTPG
TMYGSEQSYSPYQPSPSPNASAGTSPSPAGYVAPSPSGTGYTTSPRIFPSPSPINYSPMT
PGAAGSPYNPQTPGAGLDTGIGGGLMGNTEWHTVDIEVRIRDSHQDPALAGQQGVIRGIS
GGMCSVFLPAEDRVVNLLCEQLEPVVPTHGDRVKVVLGEQREAVGTLLSIDTQEGVVKLA
SGGLAMLQLRYLCKMKTPA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcggaggagagtaattactcggggagtgagaggggcggtcgcagcggtagc
ggttcggtgagatcagcagctggaagtgggagatcggtgtcccggagtcgttcgcgctcg
cgaagtcgctccaggagtcgctcgatgaggtcccgctcggggtcggggtcggagcgagga
agaggcgacgaggccgtggaggcccgatcggacgaggaggtggagcccgaggaggagccc
gagggcgaggacctggacagcgaggaggacgaggaggaggaggaggaccgacccaagaag
aaaaagaagaaggacagattctgtggcttcatcgatgacgaggctgaggtcgacgacgac
gtggaggacgacgacgagtgggaggatggggcacaggagatgggaatcgttgggaacgag
gtggacgaggtggggccaacggccagggagattgagggtcgcagacgtgggaccaatctc
tgggattcacacagggaggacgagatcgaggagtacttgaagaagaagtatgcgggcgag
tgtggtgcgactagacactttggggatgggggggaggacatgggggacgagatcacccag
cagacactgttgccaggggttaaagatcccaatttgtggatggtcaagtgcagaattggg
gaggagaaagccactgttctcctgctgatgcgtaaattcttgacttatcaatttgccaag
gatccactgcaaattaaatcggtggtggcacctgagggggtcaagggttacatttacgtt
gaggcgtacaaacagccgcacgttaaagcggctattcagaacgtcggtaatctcaggatg
ggcatttggaagcagcagatggtgccgatcaaggagatgactgatgtgctgagggttgtc
aaggagcagactggcttgagggttaaacagtgggtgagactcaagcggggactgtacaag
gatgacattgctcaggtggacaatatcgacgacttgaagcacaatcaggtgaccctaaag
cttctgccgaggattgattacacgaagccgaggggggcgctgagaacagcccagtccgag
agcgatgctctgaagaggaagaaggggagacgaccagctgccaaactcttcgatcctggg
gcgatcagagccattgggggggacataacgagcgacggagacttcctgatgttcgagggc
aacccctacagccccaagggcttcttgtacaagaagtttctcatcaatgccattgtcact
gagggggtcaagcccactctgtcggagctcgagaagttcgaggaggcaccggagggcgtg
gacctcgagctcgacaggtctgacggctccaggaagaaggacatggcgtccacccactcc
ttcagcactggcgacaatgtcgaggtctgcgagggcgagctcatgaatctccagggtaaa
atcgtgtccatcgacggcaacatgatcatggtgctgcccaagcacgaggagctcaacgat
cccctggagtttcagtccaacgagctgaggaagtacttcaaaatgggcgatcacgtgaga
gtcattgctggaaggtacgagggtgacactggcctcattctcagagttgaacagaacctt
gtggtgctgttctccgatctgtcgaatcacgagttggaggtactacccagggacctgcag
ctgagcccagatgtggcgactggggtcgacagacttgggcagtttcagtggggcgatctt
gtcgacgttgacaagcaaactgtcggcatgattgttcgtctcgagcgtgagaactttcac
gtactccagaatgacggtaaagttgtgcagaagaggccacaggagttgaccaagaggcgt
gagaatcgcaacacatttgccctcgatcatcagcagaatgaaatacgcaagagggacatc
gttaagatcatcgatgggccacacaccggtagagatggtgagatcaagcacctctaccgg
agttttgcatttgtctattcacgactgtacgtcgacaacgggggtatctacgtctgcaag
acgaggtatctgcagttggctggtggagcgaagagcaattcgtcatcggggagtggactg
ggtttcatgtctccacgtatcagttcaccgatgcacccgagcggcggagggggaaggggt
ggcggtggacgaggtcgtggccgagggggtggaggccctggtgttcgtcgtgagcgtgac
ctgataggcacgacgatcaagatcactgggggcccttacaagggtaacgtcggcatcgtg
aaggacgccactgacagcacagtcagggtggagctgcactctacctgccagacgatatct
gtcgacagatcgcacattgccaaggtgggagtgccaaccaaggacggcagcttcagctcg
tacacgaggaccccggcgtactccagtggcggacagacaccgatgtacggctccaagacc
cccatgcacggctcgcagactccgatgtacgagaatggctcgaggacaccgcattatggc
tctatgacgccttcacacgacggctcgaggacccccggacagtctggggcgtgggatcca
acggtcaccaacacaccagccagaagcaacgactttgacgcctacagtctggaagacggt
ggctccccaggctacggctacccctccactggggagcccttcacccctcagacccccggg
accatgtacgggtcggagcagagctacagtccttatcagccgagtccaagtcccaatgcc
agtgctgggactagccccagccccgctggctatgtcgctccatctccatctggtactggc
tacactaccagtccaaggatcttcccgtccccatcgcccatcaactacagccccatgact
cctggagctgctggaagtccttataatccgcagacaccgggggctggactggacactgga
atcggcgggggactcatggggaatactgagtggcacactgtcgacatcgaagtcaggatc
agggactcacatcaggatcctgcactcgctggacaacagggggtcatacgaggaatatct
ggtggaatgtgctctgtattcctgccagctgaagatcgcgtcgtgaatctgctttgcgag
caattggagccagttgtgcccactcatggtgatcgggtgaaggttgtacttggtgaacag
cgcgaggctgttggcactctcctgtctattgacacacaggagggtgtcgttaagctcgcc
agtgggggactggccatgttgcaactgagatacttgtgcaaaatgaaaacaccggcttag
DBGET
integrated database retrieval system
