Diachasma alloeum: 107044623
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Entry
107044623 CDS
T07663
Name
(RefSeq) nuclear pore complex protein Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
dam
Diachasma alloeum
Pathway
dam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107044623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107044623
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107044623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
DUF5641
Nup54_C
DUF4653
Motif
Other DBs
NCBI-GeneID:
107044623
NCBI-ProteinID:
XP_015122055
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MVTDLTAEGFIAAEELRNLFDQASSESAVIRDRLSSDGTQWIFNPPHSPHLGGKWEAAVK
STKHHLRRTITTSTLTYEEFTTLLIQVEAILNSRPLCPLTNDPQDTSALTPGHLIIGEPL
MTVPEPSLQQITTDRLNRWQIITQRIQNFWEHWERECIHRYQQIYRWRQPTNEINIGSLV
LITDEREPPAKWPLARVIEIHPGQDNLTRVVTLRKGHQKMQRAIHRLVPLPINADLLEDQ
QTESLKLIRAYIGAFIGIPIGKVIEPHPGFGSTSFGFSTPATSIPTLFGTPVTQSTGFSA
TTGFGPPAATGFGVATSSTNTYSTSGSAFGFGGGSTFGTAPSSSATAFGTLGVPVTTSAV
GFAGFGNFGGTATTTQAPSLFSGFGSASAASTGFGNTGFGGFGTKSTTTTATTVFGGFGG
ALGTSTLGNFGGPLAPPQLQQQHVSNAISEALYNAVFNCQLFNDERDNTIARWNLIQALW
GTGKAYYSANAIPIELTQENPLCRFKAIGYSCLPIADNNDGLVVLCFNKKEQELKDGKQQ
LINSITQILGNKPNLTVTVDNVKSIGEMKSQAVIYVSEKGVTGSSRKIPANELVAYLSQS
IQKQQLTQMGVENIFPQVKLDPSQLKEYMENPPCSIDPRLWKQAQLDNPNAEIYIPVPMI
GFQQVKYRLKCQEKETDKHRAFLDMAAERIQGLQRQHTATQAKLKEHRRTLLELQHRVLQ
VLVRQEITRKVGLSLQPEEEILTNRLETMHSQISAPTQFKGRISEMLSHLRMRKHVDMQS
QERYSMDPIVQDDIKAYLSLQQQGMAQLIDTINTDMESLKVIKDGMADLLTGHTIS
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggtaacggacctgacagcggagggcttcatcgcagcagaggaactcaggaatctcttc
gaccaggcatccagcgaatcggctgtcatcagggatcggctatcatcagacgggacacag
tggatattcaatccccctcactcgccacatctgggaggcaagtgggaggccgctgtgaag
tcaacaaaacatcacctcaggaggaccatcaccacctcgaccttgacgtacgaagaattt
acgactcttctgattcaggtcgaggccatactcaactctcggccactctgcccactcacc
aacgacccgcaagacacctcagcccttacaccggggcacctcatcatcggagaaccgctc
atgacggttcctgaaccatcactccagcaaatcaccacggacagactcaacaggtggcaa
attatcacccagaggatccaaaacttctgggagcattgggaacgagagtgcattcatcga
tatcagcaaatctaccggtggagacagccaacgaacgaaatcaacattggttcgttggtc
ctcatcacggacgaacgggagccaccagctaaatggcccctcgctcgagtcatcgaaatt
catccaggacaggacaacctgacaagagttgtcacactgaggaaagggcatcagaaaatg
caacgggctattcacagactagttccattgcccatcaacgcagacctactggaggatcaa
cagaccgaatcactgaaacttatccgggcctacatcggcgcatttatcgggatacccatc
ggtaaagttatcgaacctcatcctggctttggttcaacatccttcggctttagcactcca
gccacctccattccgacgcttttcggcactccagtaacacaatccaccggtttcagcgca
accactgggtttggccctccagcagccacaggatttggtgttgcaacaagtagcaccaac
acttatagtacctcagggtcggctttcggttttggaggtggttcaaccttcggaacagca
ccatcatcctcagctacagcatttggtacattaggagtcccggtcacaacaagcgctgta
ggttttgcgggatttgggaattttggaggaacggcaacaaccactcaagccccgagtctc
ttcagtggctttggatcagccagcgcagcatcaacaggattcggaaacacagggtttggt
ggatttggaactaaatcaacaaccacaacagcaactactgtatttgggggcttcggaggg
gctttagggacttcgaccttggggaattttggtgggccattagctccgcctcaattacag
caacaacatgtatctaatgcaatctctgaggctctgtacaatgcagttttcaattgtcaa
ttgttcaatgatgagagagataatacaatcgcaaggtggaacttgattcaagctctttgg
ggtactggtaaggcttattactctgcaaatgccattcccattgagctcacacaggagaat
cctctttgcaggttcaaggctatcgggtacagctgcctgccaattgccgataataatgac
ggattagttgtcttgtgtttcaataagaaagagcaggagttaaaggatggaaagcaacag
ttgattaattctattactcaaatcctgggaaataaacccaatttaactgttactgttgat
aatgtcaagtctattggagagatgaaaagtcaagccgtgatttatgtatctgaaaaaggg
gttactggatcttcacggaaaattccagctaatgagcttgtcgcgtacttatctcagagt
attcaaaagcaacagttaacgcagatgggggtggagaacatttttcctcaggtaaaactg
gacccttcgcagctaaaggagtatatggaaaatccaccttgctctatcgatccaagatta
tggaagcaagcgcagttggataaccccaatgctgagatatatattccagtgcctatgatc
gggttccagcaggtaaagtacaggttaaagtgccaagagaaagagaccgataagcatcgt
gcgttcttggatatggctgcagaaaggatacaagggctacagagacagcatacggccact
caggcaaaactgaaggaacataggcggacacttttggaattgcaacatcgggttcttcag
gtgttagtgcgacaagaaattaccagaaaagttggtctctcccttcagccagaggaagaa
atattaacaaatcgactggaaacgatgcattcacaaatcagtgcacccacacaatttaaa
ggcagaattagtgaaatgttgtcacatttaagaatgagaaaacacgttgatatgcagagt
caagagagatattctatggatcccattgtacaagatgatatcaaagcttacttgagtttg
caacaacaaggaatggctcagctgattgacacaataaacacagacatggaaagtttgaaa
gtaatcaaggatggcatggcagatctgctgacagggcatactatttcctga
DBGET
integrated database retrieval system
