Diachasma alloeum: 107044674
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Entry
107044674 CDS
T07663
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
dam
Diachasma alloeum
Pathway
dam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107044674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107044674
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107044674
mRNA degradation factors
5'-3' decay
Decapping complex
107044674
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
107044674
NCBI-ProteinID:
XP_015122120
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MADSFFGFPTSHPGSGFDDAIDCPQDDDEVGEEDEYDALNDETFGEDATDGDWEQDHEKL
AQITESTRPLVQTTASTKNGLDVDIEGSLSHLVLDEKDGIVPRPGVWDSPTLVLHPQPQP
QIHPGSQQPLPVALKFVQTVEELERGLIRPPPGLAKPPPTITNAQAPRNQFILDYSGLND
HLPVNLCQKIFNGPLRPRFPPGLALPGPHPVVLPPNVHLPNQLLQNPRPMPPNQTNLILG
RHSMPRHLIVNQRQTMHGNFVGNFPQPRLNLPQFIRPDQPVPRFAIPTNHPNQHNNQRNQ
CRSHGNEPPAANHQPFFKNNQYWHQNRNNQRYNHHRHHNQLNGLNDNGEYDEYSGLMSSR
EKQWLTNIQLLQHKTNQPYVDDYYFTVFSERQNKKNDNQDSRDRKQNNNGFGRDPRDKEQ
HVLTKVVYTPTQFENSLGKLQCGSVTAPRKIIDMDVVPNSDPQQHPQQKDMKKARQRLLE
IERLYTVQLKLEDLSNPLAQVAEPLEQPQENEEPKAPKKTAPELINIMLTSLIQLLHEDK
LASILSIRKGKNLLLRFLPFLSVTEYGAQLGELWTGLLRGLAIVGRRDAYLLVKFFPEFH
RWIETTRDFETVLRLARGFLDSVNQNSRINNSLAFAVTNKFGVSVIASLLEQAENLYPDD
KAMTQEWSTFIVSLSEAVGASTPSVAPCHPVAANTLHQHLKRIGSLKTERYEPLESLLTD
ANPSR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcttttttcggatttccaacgtcacacccaggaagtggattcgacgatgca
atagattgcccccaagacgatgacgaagtaggcgaggaggacgagtacgatgccctgaac
gacgagaccttcggcgaggacgcgaccgacggtgactgggagcaggaccacgagaaattg
gcccagataaccgagtcaactcgtcccctggtgcaaaccaccgcttccacgaagaatggg
ctggacgtggacatcgagggtagcttatcccacctagttctcgacgagaaggacggaata
gtcccccggccaggtgtctgggacagtcccacgctggtactacacccccagccccagccc
cagattcaccccgggtcccagcagcccctgccagtggccttgaaattcgttcaaacagtc
gaggagctagagcgaggtctcatccgccccccgccaggtctagcaaagcccccgccaacg
ataacaaacgcccaggcccccaggaaccagtttatcctggactattcaggtctcaacgac
cacttgccagttaatttatgccagaaaatcttcaacggccccctccgaccgagatttccc
ccaggtctagccctccctgggccccacccggtggttctccccccaaacgttcacctcccc
aaccaattactccaaaacccacgtcccatgccaccgaatcaaacaaatctcatactgggg
cgccactccatgccccgccacctgatagtgaatcaacgtcaaacaatgcacggcaacttc
gtgggaaatttcccccagccaagactcaacctcccgcagttcattcgacccgaccagcca
gtgccgcgattcgccattccaacgaatcacccgaatcagcacaacaatcagagaaatcag
tgcagaagtcacggtaacgagccaccagcagccaatcaccagccatttttcaagaacaat
cagtactggcatcagaatcgtaataaccagaggtacaatcatcatcgtcatcataatcag
ctgaatgggctgaacgataatggggagtatgacgagtactctgggctgatgagctccagg
gagaagcagtggctgacgaatattcagttgctccagcacaagaccaatcagccttatgtc
gatgattactacttcactgtgttctcggagaggcagaataagaagaatgataatcaggac
agcagggataggaagcagaataataatgggtttgggagggatccgagggacaaggagcag
catgtgttgacgaaggttgtttataccccgacgcagtttgagaattctctggggaagctg
cagtgcgggagtgtcacagcacccaggaagatcattgatatggatgtggtgcccaatagc
gatcctcagcagcatccgcagcagaaggacatgaagaaggcgaggcagcggttgttggag
attgagagactgtacacggtgcagctcaagctcgaggatttgagcaatcccctggctcag
gtggctgagccactggagcagccccaggagaacgaggagcccaaagcccccaagaaaact
gcccctgagctcattaacatcatgctgacgtcactcattcaactgctgcatgaggacaaa
ctcgccagcattctcagtattcggaaggggaagaatcttttgctgaggtttctgcctttc
ttgagtgtcacggagtacggtgcacagctgggcgaactgtggactgggctgctcaggggg
ctggccattgttggcaggcgggatgcctatctgctggtgaagttcttcccagagtttcac
aggtggattgagactactagggattttgagactgttctgagactggcaagggggttcttg
gactcggtcaatcagaacagcaggattaataatagtctcgcttttgctgtgaccaataag
tttggagtctctgtgattgcatcgctcctcgagcaagcagaaaatctctaccccgatgac
aaagcaatgacacaagaatggtcaacattcatcgttagtctatccgaggcagttggtgca
tcgacaccgagtgtagcaccctgtcatccagtcgctgctaacacactccatcagcatctc
aagagaattggcagtctcaaaacagaaaggtacgaaccactagagtcactcctcactgac
gcaaacccatcgcgatag
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