Diachasma alloeum: 107045234
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Entry
107045234 CDS
T07663
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dam
Diachasma alloeum
Pathway
dam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107045234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dam03021
]
107045234
Enzymes [BR:
dam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107045234
Transcription machinery [BR:
dam03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107045234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107045234
NCBI-ProteinID:
XP_015122909
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MAFRSGLPSDQTPKHLYPKSLVFSVFTAEDIKNLSVVKICTPLSFNVLGHPLRGGLYDPS
LGPLNEHSDPCGTCGENVYTCTGHFGHIELPVLVVNPLFHKVLCSLVKLSCLNCFTIQIP
AHVKLVLSAKLKLINEGFYTDLEGLEQEVASVLSEPAVGQEAQAELVREAVDGYVRNLHE
RRAYGKMCEGEVQVHTKNVNTLWQIHVESVVKMHKPEKVCLYCKIPISKVSILKNRIMIS
KAAIYDDEHRGVAQKTMSVLLMPDQSRKYMRRVWDNDREILKVIVPCLGVLKTEYPVDVF
YFEVIPVLPPIVRPVNFLDGQLMEHPQTQVYKHIMQDCLVLRNIIQTIQDGDTSQLPEEG
KLVFETIRGTTPLEKLHNAWSALQGNVDHLMDRDMSKTAESMLCQGLKQIIEKKEGAIRM
HMMGKRVNYAARSVITPDPNLNIDEIGIPEAFALKLTYPVPVTPWNVAEMRELVMNGPDQ
HPGAVKIEGEDGFIRRINPNDRISREAIAKRLLTEGHKNEKSFQGVKIVHRHLQNGDIML
LNRQPTLHKPSIMAHKARILKGEKTLRLHYSNCKAYNADFDGDEMNVHFPQNEVSRSEGY
FIANVSNQYLVPKDGTPLGGLIQDHVISGVRLTVRGKFLSKQDYMQLVYAGLYDHRGDIQ
ILPPAIIKPVQLWSGKQVLSTIIINSIPRGKARINLTAGAKIPAKSWERQPPRKWRQGIE
FTDPKTMSEAEVIIRNGELLSGVLDKTHYGATPYGLIHCMYELYGGPCSSKVLSAFGKVF
QSHLQLCGFTLGIEDILVLPKSDNKRKEIIERCRKIGDDIQKTALELPEDTPRDVVLKKM
EENNWRNKRFRGLIDRKYKTALDPFTNEINKTCLPAGLRKKFPENNLQLMVTSGAKGSTV
NTMQISCLLGQIELEGKRPPLMISGKSLPSFPPYDSSPRAGGFIDGRFMTGIQPQEFFFH
CMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLTVGYDSTVRDSDGSLVQMYYGEDGLDIP
NSRFLRKEQMEFLVENRGAIVDERLVESLKETSDTKNIQKMGKRLRKWKSKHGDVLRKSR
ESGFTIFTKENGSNSAKGNIIDGTVGRSKGSLSLVKKWVRADGEVKKSFNDKVVRCPEPL
TSKYRQDLEFGVLTEHLEELMDGYLRTPRSYGPPVTRDEIRDMLSCKVMKTLCPPGEAVG
LLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFRRDL
KNLTRQSNKLKLKLTRCVLSDVVRSIKIDRKMETYPNRQLEYALTIQYLPHKNYKHEFNV
TSREVVEKTETLFFKQMFREIKKVAKVSGTLLHVEEEKRKNTAQEDSMLDEADDGEPVSR
KIKQDFGEEHESSDEDEAPEDEDATAARSKSRHQENREYDDPEEDEVINDDEDEAEDEER
KPDVLEDDVEEVNEEIDLADQAAADQRKIDVANMYSYAVEYDFDAGKYLWCKFRFWLPLR
MIKIDLPTILKNVAGKVVLWETPSIKKAFTFPNAKGETVLKTDGINIVEMFKYDKVLDIR
RLYSNDIWGISQTYGIEAANRVIVKEVKDVFKMYGITVDPRHLSLIADYMTFDGSFQPMS
RKGMENSASPLQQMSFESSLTFLKSATLQGKRDDLTSPSSRLMLGQPCRTGTGAFDVYLK
MSSAMKPVKSSL
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggcattccgcagtggtttaccgtcagaccagaccccgaagcacctctaccccaagagc
ctcgtcttctcggtcttcacagcggaggacataaagaacctcagtgtcgtgaagatctgc
acgcccttgtccttcaacgtcctggggcaccccctcaggggaggcctgtacgacccctcc
ctggggccactgaacgaacactctgacccctgtggcacctgcggggagaacgtctacacc
tgcaccgggcactttggacacattgagctcccagtgctggtggtcaaccccctcttccac
aaagtcctctgcagtctcgtgaaattgtcatgtctgaactgcttcaccattcagattcct
gcgcacgtcaagctcgtgctgtcagcgaaattaaaactgattaatgaaggattttacact
gacctcgagggtctggagcaagaggttgcctcggtcctgtcggagcctgcagtgggccag
gaggcacaggccgagctggtgcgcgaggccgtcgatggttacgtcaggaacctccacgag
aggagggcctacgggaaaatgtgcgagggcgaagtccaggtgcacacgaagaacgttaat
actttgtggcagatccatgtggagtctgtggtgaagatgcacaagccggagaaggtctgt
ctttactgcaagatacccatctccaaggtgtccattctgaagaataggatcatgatctct
aaggctgctatttatgacgacgagcacaggggggtggcccagaagaccatgagtgttctg
cttatgccggatcagtccaggaagtacatgagacgcgtttgggataatgatagggagatc
ttgaaggtaattgttccctgcctaggggttctcaaaaccgagtaccccgtggatgtcttc
tacttcgaggtgattccagtgctccccccaatagttcgcccggtgaacttcctcgacggg
caattaatggaacacccccagacgcaagtctacaagcacataatgcaggactgcctggtc
ctcaggaacatcatccaaacgatccaagacggtgacaccagccaactccccgaagaaggg
aaactggtcttcgagactattcgagggacgactcccctggagaaactccacaacgcgtgg
tcagcccttcagggtaacgtggaccacctcatggacagggacatgtcgaagacagctgaa
tcgatgctctgtcaaggcttgaaacagatcatcgagaagaaggaaggggcgataagaatg
cacatgatgggaaagcgtgtgaattacgcggccagatcagtcataactccagaccccaat
ctgaacatcgatgagataggaattccagaggcatttgctctcaagttgacgtaccccgtc
cccgtgactccgtggaacgtcgcagaaatgagggaattggtgatgaatggtcctgatcag
catccgggggctgtgaagatcgagggtgaggacggtttcatcaggagaatcaatcccaat
gacaggatcagcagggaagccattgctaagaggcttctcacagagggacacaagaatgaa
aagtcctttcaaggggtcaagattgtgcacaggcatctacagaatggggatattatgctg
ttgaatcgacagccaactctccataaaccgtctattatggcgcacaaggcgaggattctc
aaaggtgaaaaaaccctccgccttcactattcaaactgcaaagcctacaacgccgacttc
gacggtgacgagatgaacgttcacttcccccagaacgaggtctccagatccgagggctac
ttcatcgccaacgtctccaaccagtacctggtcccgaaggacgggacccccttggggggc
ctcatccaggatcacgtcatctcaggggtgcgtctgaccgtccgaggaaaattcctctcc
aagcaagactacatgcaactggtctatgcaggtctctacgaccaccgtggggacattcag
atcctccccccagccatcatcaaacccgttcaactctggtcgggaaagcaggtgctgtcc
acgatcatcatcaacagcattcccaggggaaaagctaggataaacttgacagctggtgct
aaaatcccagcgaaatcctgggagagacagccaccgagaaaatggcgacagggaattgaa
ttcactgaccccaagaccatgtccgaggctgaagtcatcatcagaaatggagaacttctg
tccggagttcttgataaaacccattatggagcaactccctacggtctcatccactgcatg
tacgagttgtacggtggcccctgttcctcgaaggtcctcagtgcctttgggaaagtcttc
cagtcgcaccttcaactctgcggcttcaccctcggcatcgaagacatcctggtcctccca
aagagcgacaataaacgaaaagagatcatcgagaggtgcaggaagatcggtgatgatatc
cagaaaacagcactggaactgcctgaggacactccacgcgatgttgtcctcaagaagatg
gaggagaacaactggaggaacaagaggttccgagggctgattgacagaaagtacaagaca
gctttggatcccttcaccaacgagatcaacaagacttgtctccctgcggggctgaggaag
aagtttccagagaataatcttcagctgatggtgacttcgggggcgaagggatccaccgtc
aacaccatgcagatctcctgtcttctagggcagattgaactcgaggggaaaagaccgccc
ctgatgatcagtggaaagtctctccctagttttccaccttacgactcgtcccccagggct
ggggggttcattgatggaagatttatgactggaattcagcctcaggagttcttctttcat
tgcatggcagggcgtgaggggctgattgatacagctgtgaagacgagcaggtctggatac
cttcagaggtgcctgatcaagcatcttgaaggactgacggttggctatgactccacagtg
agagactctgacggcagtcttgtgcagatgtactacggagaggatggcctggacataccg
aactccaggttcttgaggaaggagcagatggagttcctggtggagaacagaggggctatt
gtcgacgagaggctcgtggagagtctcaaggaaacgagtgataccaagaatattcagaag
atggggaagaggttgaggaagtggaagagcaagcatggagatgtgttgagaaagtccagg
gaaagtgggtttaccattttcacgaaggagaatggatctaatagcgcaaaagggaatatt
attgatggcactgttgggaggagcaaggggtcactgtcactggtcaagaagtgggttcga
gctgatggggaggtcaagaagtctttcaatgataaagttgtcagatgcccagagcccttg
acctcgaaataccgtcaagacctggagttcggggttctcaccgagcacctcgaggagctc
atggacggctacctgaggaccccaaggtcctacggccccccagtcaccagggacgaaatt
cgtgacatgctctcctgcaaagtcatgaagaccctgtgtccccctggtgaggcagttggt
cttctcgctgctcagtccatcggtgaaccctccacccagatgaccctcaacaccttccac
ttcgcgggtcgtggtgagatgaacgtgaccctgggtatccccagactccgggagatcctc
atgatggcgtcgaagaacatcaagacccccagtatggagatccctttcaggagggatctg
aagaatctcacgagacagtccaacaaattgaaattaaaactgacgagatgtgtcttgtct
gacgtcgtgaggtccataaaaatcgacaggaagatggaaacgtatcccaatagacaactg
gagtacgcattgacaattcagtatcttcctcacaaaaactacaagcacgagttcaatgtc
acgtccagggaggtcgttgaaaaaactgagaccctcttctttaagcagatgttcagggaa
ataaagaaggtggcgaaggtctcgggaactctgctccacgtggaggaggagaagaggaag
aatacagcacaggaggactcgatgctggacgaggctgacgatggagaaccagttagcagg
aagattaaacaggactttggggaggagcatgagtcttccgacgaggatgaagcccccgag
gatgaggatgccactgcagccaggagcaagtccaggcatcaggagaaccgggagtacgat
gatcctgaggaggacgaggtcattaatgatgacgaggacgaggctgaggatgaagagagg
aaacctgacgtccttgaagatgacgtcgaggaggtgaacgaggagattgatcttgcggat
caggcggctgctgatcagaggaaaatagacgttgctaatatgtacagttatgctgtggag
tatgactttgacgcgggaaagtatctctggtgcaaattcaggttctggctgcctctgagg
atgattaagattgatttgccgacgatcctgaagaatgtcgcggggaaggtggtgctttgg
gagacaccttccatcaagaaggctttcacctttcccaatgccaagggggagactgttctc
aagaccgatgggatcaatattgtggagatgttcaagtatgataaggtcttggacattagg
aggctgtactctaatgacatctgggggatctctcagacttatgggattgaggctgctaat
agggtcatcgtgaaggaggtgaaggatgtcttcaagatgtatggaatcactgttgacccc
aggcatctgtcacttattgctgattatatgactttcgatgggagctttcagccgatgagc
aggaagggcatggagaactcggcttcgccactccagcagatgagttttgagagctcgttg
acgttcttgaagagtgctactttgcaaggtaaacgagatgacttaacgtctccatcgagt
cgtttgatgctcgggcaaccgtgtagaactggcactggagccttcgacgtctacctgaag
atgtcctctgcgatgaaaccagtgaaatcatccctttaa
DBGET
integrated database retrieval system
