Diachasma alloeum: 107045454
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Entry
107045454 CDS
T07663
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dam
Diachasma alloeum
Pathway
dam03013
Nucleocytoplasmic transport
dam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107045454
03015 mRNA surveillance pathway
107045454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107045454
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107045454
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107045454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
107045454
NCBI-ProteinID:
XP_015123236
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MTTEKVDWGKLAEEGDLLASSVTNLTIKQNSTPPETNGVDASDTEKAPTAAEESLLKKLL
HKSLVESKQELEIQRKNPHSPLYSVKSFEELKLQPKLLMGVYDMGFMKPSKIQEMALPTL
LADPPGNMIAQSQSGTGKTAAFVLAMLSRVDTSKPYPQVLCLSPTYELAIQTGEVAAKMS
KHCPEIKIKYAVRGEQMARGEKITDHIIIGTPGKALDWSLKFRFFDLNKITVFVLDEADV
MIATQGHQDQCIRIHKMLPKTCQIMFFSATYEKAVMDFAEIIVDAPMIIRLLKEEECLDN
IKQFYVNCQDMEAKYDAITTIYTNLTGQAIIFCHTRRTASWLAEKMVDEGFTVAVLSGDM
TVEDRIRVLDLFKEGCVTVLVTTNVLARGIDVDQVSLVVNFDLPIDQQRKADHETYLHRI
GRTGRFGKKGIAVNLVDSPQAAAICQDMERHFGKKIELLDIGCRDLKAKIRQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggagaaagttgactggggtaaacttgcagaggagggagacctattggcgtct
agcgtcacaaacttgaccatcaaacaaaacagcacaccccctgaaaccaatggagttgat
gcctccgacactgaaaaagccccgacagcagcagaagagtccctcctcaagaaactcctc
cacaagtctctcgtcgagtccaaacaggagctggaaatccagcgtaagaacccacactca
cccctgtacagtgtgaaatcgttcgaggagctgaaactccagccgaagcttctgatgggg
gtctacgacatggggttcatgaagccctcgaagatccaggaaatggccctgccaactttg
ctggctgatccaccagggaatatgatcgcccagtcccagtctggcactgggaaaacagct
gccttcgtgctggccatgctgagcagggtcgacacgtcgaaaccttatccccaggtgctc
tgtttatcacctacttatgagttggctattcagactggggaggtagctgccaagatgtcc
aagcactgtcctgagatcaagatcaagtatgctgtgaggggagaacagatggcaagaggt
gagaagatcacggaccacataatcatcggcacccctggcaaagccctggactggtccctc
aaatttcgattcttcgatctcaacaaaatcacagtttttgttctcgacgaggccgacgtg
atgattgccacacagggtcatcaggaccagtgcatcaggattcacaagatgttacccaag
acatgtcagataatgttcttctcggcgacgtatgaaaaagcagtgatggactttgctgag
atcattgtcgacgctcccatgatcatcagactgctgaaggaggaagaatgtttagacaac
atcaagcagttctacgtcaactgccaggacatggaagccaaatacgacgccatcaccacg
atctacacgaatctcacaggacaggccatcattttctgtcacacgaggaggactgcttcg
tggctggctgagaaaatggtcgatgagggattcacagtggctgtattgtctggggatatg
actgtcgaggatcgaatcagagttctggatctcttcaaggagggctgtgtcactgttctg
gtgacaactaatgtgttagctcgaggcattgacgtggatcaggtgtctctcgtcgtaaat
ttcgatctccccattgatcaacaacggaaagcagaccacgagacgtacctccacaggatc
ggtagaacaggtagatttggaaagaaaggaatcgccgtaaacctcgtcgactccccccag
gcagcggctatttgccaggacatggagagacacttcgggaagaaaatcgaactcctcgac
ataggttgtcgggacctcaaggctaaaattcgacagtag
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