Diachasma alloeum: 107046237
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Entry
107046237 CDS
T07663
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
dam
Diachasma alloeum
Pathway
dam03018
RNA degradation
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107046237
09123 Folding, sorting and degradation
03018 RNA degradation
107046237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107046237
03041 Spliceosome [BR:
dam03041
]
107046237
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107046237
mRNA degradation factors
5'-3' decay
Lsm complex
107046237
Spliceosome [BR:
dam03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107046237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
107046237
NCBI-ProteinID:
XP_015124301
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSLTQGVEQVVLGLH
IIRGDNVAIVGELDDEIDSRLDLGSIRAEPLTSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggactagaaagctacgtgaatcatactgtgtcaatcatcacatcagatgga
cgaaatttcatcggaacactgaagggatttgatcagacgattaatctaattctcgatgaa
tctcacgaacgagtctatagcttaacacagggagttgaacaagttgttttgggcttgcat
ataattagaggagataatgtagcaattgtgggagaattggacgatgaaatcgattcgcgt
ctggaccttggatcaatccgagctgaaccccttacatcagtggctcactga
DBGET
integrated database retrieval system
