Diachasma alloeum: 107046989
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Entry
107046989 CDS
T07663
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
dam
Diachasma alloeum
Pathway
dam03018
RNA degradation
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107046989
09123 Folding, sorting and degradation
03018 RNA degradation
107046989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107046989
03041 Spliceosome [BR:
dam03041
]
107046989
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107046989
mRNA degradation factors
5'-3' decay
Lsm complex
107046989
Spliceosome [BR:
dam03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107046989
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
107046989
NCBI-ProteinID:
XP_015125205
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MTSSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGNNITMLVPGGDMPDT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacgagttctgtcagcacgaatccatcgaccctcttgcctctcgagctcgtggacaag
tgtatcggatcgaggattcacattatcatgaagaatgataaggaaattgtggggactctc
ctggggttcgacgatttcgtgaatatgctcctggaggatgtcactgagagcgaggccacc
ccggagggcaggcgggttaccaaactcgatcagattctcctgaatggaaataacataaca
atgctggtgcccggtggagacatgccagatacgtaa
DBGET
integrated database retrieval system
