Diachasma alloeum: 107047516
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Entry
107047516 CDS
T07663
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dam
Diachasma alloeum
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dam03036
]
107047516
Chromosome and associated proteins [BR:
dam03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107047516
microRNA pathway
RISC loading complex
107047516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Dicer_platform
Dicer_dimer
Ribonucleas_3_3
PAZ
Helicase_C
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
107047516
NCBI-ProteinID:
XP_015125778
LinkDB
All DBs
Position
Unknown
AA seq
1955 aa
AA seq
DB search
MAFPLNDQVYTKSFTPREYQVELLYTAKQRNIIICLGKYTEQTFIVTKLIQEYATGNRSP
VRSSQRIVYLLDNEESCSLKSSYIEQLTDLKVSLINSTIRENEFTHNFATANVIVTTSQI
FHQLVKTKAISGEQISLLIFDQCQLLIKNEEIGDSLGILRGSLGSEGLRVIGLAIPLLDL
TEEPGRLSLEINRLERTFKCDVETTSDILSILRYSPRPKEYIIEFDTSPTGALQSALQTV
ALDAMTFLDDHRYDPTEIYQDEFLEDIQKIPDPTEKPQEMLQDFLTILETLGPWCADRAA
LSLLTLSEKLKIKTPYERHYLLLNLVGSVMIKIRALCDLEFSSIPEKTRVYTYSTSKVHR
LLGALKTYAPLYKKSSDSPEKIPRRNNRLQETITSKPNHSQSSSHPEEPNVPNKRGRYQR
TFRGMTDPDVLCGVIFVDKSFTAKILFYLLNEVSKHDEDLSFLSPLYTIEKNTDDSSYSR
DPEAEHKKQEEVLKRFRIHECNLLVATAVLEEGIEIPKCNFVMRYDFPRTYRSYVQCKSR
ARATDALHILLISNTSAGESIWQLAQYHYIEKILLEKCTNEEPREDDESEADKYSSMIPC
YQPLKSENGPLVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIIELKLKEGTMYSCSLRLP
INSPLKYVITSHPMPNKAMARRLAALQMCINLHKENEIDDNLLPIGKENFKARPEDVEVP
ALPDEIRSEYSEARPGTTKRRQYYYKKTAEALTDCRPTVGVPSYLYHIKMILSCPLPEEQ
NTRGRRIYPPEESDIGFGILTLKKIPKLSPFPIYTRSGEVQVELKLSKNTVVLDSIQIER
VSTFLNYSFTNVLKLQKYLMIFDPNASENSYLIVPVVKGKSKGVEDINVDWNFLQLIYEN
RNTIPSEVGEKERENFQFDASRYNDAVIMPWYRNQDQPQYFYVAEICRNLSPKSSFPGDG
YSTFEEYYSKKYGIKIQNRDQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKR
ENLEQKQILVAELCAIHPFPASLWRQAVCLPCILYRINALLLANQIRCQVAQMMNLGLQH
LSEDFEWPPLNFGWSLAEVLKKSKEVKKVEPEEPREPRKSPTPEIIERRPMRMIIEDVTD
LLEDEDGDADKLEIGTWSNDMAVESMCMDYEAMSNNVTVLPPQFGWNSDGNGVRCGSPTF
DQSDTYGYYSDDSYSDDGFVESSEDSEDEKNRGIRISYTGENTAEAVEDESKLKKININK
KILTLFNDSERKLYNSRFLFKSGENDSCDESLFAEHKRLHFDYARKREAEIIVDGSFIKS
DREIVFNHGQKGLKASGADDLGFNSTLEHCEHVRRVAEEITREIEREKLAGDSFYFKSQG
NSNNIPTPGLYDAVEVNFSFDYQPELRGHPGPSPSLILQALTMSNANDGINLERLETIGD
SFLKYAITTYLYCTYPVIHEGKLSHLRSKQVSNLNLYRLGRRKMLGESMIATKFEPHDNW
LPPCYYVPRELEQVFIESGVPSSLWNQAQDLHSLQPTLDISEITQLIRDTEYKLRILRME
LDKNENRLTEDPQIPDTQHCSIPYNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLF
MAWLGIHVLPTLEVTLVQENEPLDHHPGSTPYVRSMDPSGRTTWSQTRYGKLEEPRNPLL
RHVPDPENELSLMLDGYDKLEESIHYKFKDASYLLQAFTHASYQPNRLTDCYQRLEFLGD
AVLDYLITRHLYEDTRQHSPGALTDLRSALVNNTIFASLAVRCGFHRYFRHLSPGLNVVI
DRFVRIQEENGHSISEEYYLIGDEEAEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAV
WSVYYRIMKTEIEQFSTNVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFGKGS
FKGIGRNYRIAKCTAAKCALKKLKKMQSSSQRQKI
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atggcctttcccttaaacgatcaagtctacacgaagtctttcaccccgcgagagtaccag
gtggaattactctacaccgctaaacagagaaatatcataatatgtctaggaaaatacaca
gaacaaacatttatcgtaacaaaattaattcaggagtatgcgacaggaaatcgaagtcca
gtccgctcctcccagagaattgtttacctactagataacgaagagtcttgttccctgaaa
tctagttatatcgagcaattgacagacttgaaagtatcactcatcaattccacaatcagg
gagaatgaattcacgcacaattttgcaacggcgaacgtcatcgtcacgacgagccagatt
tttcaccaattggtcaagacgaaagcgatctctggggagcagattagtttattgattttc
gatcagtgccagttgttgattaagaatgaggagattggggactctctggggatcctgagg
gggtccctagggagtgaaggattgagggtgattggtttggcgattcctttgttggatctc
acggaggagcctggaagactgagcttggagattaatcggttggagagaacctttaaatgt
gatgtagagacgactagtgatattttatcaattttaagatacagcccgagaccaaaagaa
tacataatagaattcgacacatcgcccacgggggccctccagtccgccctccaaacggtg
gcgctggacgcgatgaccttcctagacgaccacagatacgaccccaccgagatctaccag
gacgagttcctcgaggacatccagaagatcccagacccaacggagaagccccaagagatg
ctccaggacttcctgacaatcctagagaccctgggtccctggtgtgccgaccgtgccgcc
ctctccctgctcaccctctccgagaaactaaagataaaaaccccctacgagcgtcactac
ctcctcctcaacctcgtcggctccgtgatgataaagatccgtgccctctgcgacctcgag
ttctcctcgatacccgagaagacccgagtctacacctactcaacatcaaaagtccaccgc
ctcctgggtgccctgaagacgtacgcccccctgtacaaaaagtcctccgacagtcccgag
aaaataccccgaagaaacaatcgtctccaggagacaatcacttccaagcccaatcactcc
cagtcgagctcccaccctgaggagcccaacgtccccaacaaacgaggcagataccagagg
accttccgaggcatgacagacccagacgtcctctgcggggtgatcttcgtggacaaaagt
ttcacagcaaaaatactcttctacctcctgaacgaagtctcaaaacacgacgaagacctg
agcttcctgtcgcccctgtacacaatcgagaagaacaccgacgactcgagttactcacga
gaccctgaggcggagcacaagaagcaggaggaggtgctaaagcgcttcagaatccacgaa
tgcaatctcctggtggcgacagctgtcctggaggaaggaatagagattccaaaatgcaac
tttgtgatgagatacgacttccccaggacgtaccgatcctacgtgcaatgcaagagccga
gccagggcgacagacgccctccacatactactgatatcgaacacaagtgctggggagtca
atctggcagctggcgcagtaccactacatcgagaaaattctcctggagaagtgcacgaac
gaggagcccagggaggacgacgagagcgaggctgacaagtactcctcgatgatcccatgt
taccagccactgaagagtgaaaatggccctctggttacgtttaactctgcgatatccctg
gtgaacagatactgcgctaaactccccagtgacacgttcacgaggctgacaccagagtgg
tcgataattgaattgaaattgaaggaggggacgatgtactcgtgctccctgaggcttccc
ataaactcccccttgaaatacgtgataacctcccacccaatgcccaataaagcgatggcc
aggagactggcagccctgcagatgtgcattaatctccacaaagagaacgagatagacgac
aatttactgccaattggaaaggagaacttcaaagcgagacctgaggacgtggaggtgcca
gcactgcccgacgaaatcaggtctgagtactcggaggctcgacctggcaccacaaaacgt
cgtcagtactactacaagaagactgctgaggctctcaccgactgcagaccgactgttgga
gtcccctcgtacctctaccacatcaagatgatcctcagttgtcctctgcctgaggagcag
aacaccaggggcaggcggatataccccccagaggagtcagacattggcttcgggattctc
acgctgaagaagatccccaagctcagtcctttccccatttacactcgttctggcgaggtc
caggtggagctgaagctcagcaaaaacactgttgtcttggactccattcagattgaacgg
gtctcgacgttcctcaactactcattcacgaatgtcctcaagctgcagaagtacctcatg
atcttcgatccgaacgcctccgagaactcctacctcatagttcctgttgtcaagggtaag
tcgaagggggtggaggacataaacgtcgactggaacttcctccagctgatctacgagaac
aggaacacgattccgagtgaagttggggagaaggagagggagaattttcagttcgacgcc
tccaggtacaacgacgctgtgataatgccctggtacaggaaccaggaccagccccagtac
ttctacgttgctgagatatgcaggaatttgagccccaaatcgtcgttccctggggatggc
tacagcacctttgaggagtactactcaaaaaaatatggcatcaagattcagaacagggat
cagccgcttctcgacgtggaccacacgtcagccagactgaatttcctgacccccaggtat
gtgaacagaaagggagtggctctgcccaccagcagtgaagagaccaaaagagctaaacga
gagaatctcgagcagaagcagatcctggtggctgaactctgcgccatccacccattccca
gcttctttgtggaggcaggctgtctgcctgccttgcatactatacagaataaacgctctg
ctgctggcgaatcagataaggtgccaagtggcccagatgatgaacctgggactgcagcat
ctctccgaggatttcgagtggccacccctgaatttcggttggagccttgccgaggtcttg
aagaagtccaaggaggtgaagaaggtcgaacctgaggagcctagagagccccgtaaatcc
ccaacacctgagatcatcgagaggagacccatgaggatgatcatcgaggatgtgacagat
ctccttgaggacgaggacggagatgctgataaactggagattggaacgtggtccaatgac
atggctgtggagtccatgtgcatggattacgaggcaatgtccaacaatgtcactgttctc
ccaccccagtttgggtggaacagtgatgggaatggggtcaggtgcggctcccccacgttc
gatcagtcagacacttatgggtattactctgatgactcgtacagtgacgatgggttcgtc
gagtcttccgaggatagcgaggacgagaagaatcgagggatcaggatatcgtacactggg
gaaaatactgcggaagctgttgaggacgaatccaagctcaagaagattaatatcaataag
aagatcttgactttgttcaatgactctgagagaaaactctataactcgaggtttttgttt
aaatccggggaaaatgacagctgtgatgagtctctgtttgctgagcacaagaggctgcac
ttcgattacgctaggaaacgtgaggctgagattattgtcgatggttcgttcatcaaaagt
gatagagaaatagtatttaatcatggccagaagggcctgaaggcgtcgggtgctgatgat
ttagggtttaattcgacgttggagcactgtgagcatgtgaggagagtggctgaggagatt
acgagggagattgagagggagaaattggccggtgattcgttttattttaaaagtcagggt
aatagtaacaacattccaacacctgggttgtatgacgcggtggaggtgaactttagcttt
gattatcagccggaactcaggggacatccggggccaagtcctagtcttattcttcaggct
cttaccatgtccaatgccaatgatgggatcaatctggagaggctggagaccattggggat
tcttttcttaaatatgccattactacgtatttgtactgtacgtatccggtgattcatgag
gggaagctcagccatttgagatcgaagcaggtcagcaatttaaacctgtaccgcctgggg
cgtcgaaaaatgctaggcgagagtatgatagccacaaaattcgagccgcacgacaactgg
ctgccgccgtgctactacgttccccgtgagctcgagcaggtgttcatagagtccggagtg
ccctcgagcctctggaaccaggctcaagacctccactccctgcagccaaccctcgacata
agtgagatcacacaactaattcgcgacactgagtacaaactgagaatactgagaatggag
ctggataagaacgagaatcgtctcacagaggacccgcagatccccgacacccagcactgc
tcgatcccctacaacttgatcacccagcacagtatcccagacaagagcatagctgactgt
gtggaggccctgataggggcttacttgatagcctgtgggcccagaggagccctgctcttc
atggcctggctgggaatccacgttctaccaacactagaggtcactctagtccaggagaat
gagccattggatcaccacccaggtagcacgccctacgtcaggagcatggacccctctggg
aggacaacgtggtcccaaactcgatatggaaagctcgaggagcccaggaaccccctcctc
aggcacgtgccagacccagagaacgagctgtccctgatgctggatggctacgacaaactc
gaagagagcattcactacaagttcaaggacgccagctacctcctccaggccttcacccac
gcatcatatcaacccaacaggctgactgactgttatcaacgtctggagttcctcggggac
gcagtactggactacctgatcaccaggcatctctacgaggacacgaggcagcactcccca
ggggccctgaccgatttgaggtctgccctggtgaacaacacgatctttgcttcactcgct
gtgaggtgcggcttccacaggtacttcaggcatctctccccgggtctcaacgtcgttata
gacagattcgtgaggattcaggaggagaatggccattccatcagtgaggagtattattta
attggggacgaggaggctgaagaggctgaggatgtcgaggtgcccaaggctcttggggat
gtcttcgagtctctggctggtgctatttatctcgacagtggaatgtccctggatgctgtc
tggagtgtctactacagaattatgaagactgagattgaacagttcagtactaatgtgccc
aaatcaccgattcgtgagcttctcgagcttgagccggagactgctaaattcggaaagcct
gagaagctcgctgatggacgcagagtgagggtcactgtcgatgtctttgggaaaggatcc
ttcaagggcatcgggagaaactacaggatagccaagtgtactgctgctaagtgtgctctt
aagaaactcaagaaaatgcaatcatcttcccaaagacaaaaaatttga
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