Diachasma alloeum: 107047831
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Entry
107047831 CDS
T07663
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
dam
Diachasma alloeum
Pathway
dam03015
mRNA surveillance pathway
dam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107047831
09123 Folding, sorting and degradation
03018 RNA degradation
107047831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107047831
03041 Spliceosome [BR:
dam03041
]
107047831
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107047831
mRNA cycle factors
Stress granule specific factors
107047831
Spliceosome [BR:
dam03041
]
Complex C
Other components
Complex C specific factors
107047831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_10
RRM_occluded
RRM_ACIN1
RBD_RDR6
POP1_C
PnpCD_PnpD_N
Motif
Other DBs
NCBI-GeneID:
107047831
NCBI-ProteinID:
XP_015126171
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MNPGAPNYPMASLYVGDLQSDITEAMLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQ
QPADAERALDTMNFDMLKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFS
AFGNILSCKVAQDETGESKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKER
EKELGEKAKLFTNVYVKNFGEDMTDEKLKDMFEKYGTITSYKVMAKDDGKSCGFGFVAFE
DPEAAEQAVLELNGKEITEGKYMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYV
KNLDDTIDDERLRKEFTTFGTITSAKVMLEDGRSKGFGFVCFSAPEEATKAVTEMNGRIV
GTKPLYVALAQRKDERKAHLASQYIQRMSNLRMQQMGPMYQTGGAGSFFVPTLPQPQRFY
GPAQMAQVRATPRWAAQPNQVRPNAQTGSSGFATMQAPFRATPRAPGAQAGAMRNAMSAR
PITGQQAVGNINAQGRAMAGASVGVSPAQNRPPNYKYNLNVRNPPQAMAMPQPAPVQQAV
HIQGQEPLTASMLAAALPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHML
EHNESLKAKVEEAVAVLQAHQAKQAVKKE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaggtgcaccaaactatccaatggcttcactttacgttggtgatctccagtcg
gacatcaccgaagctatgctgtttgagaaattctcaactgctggacctgtactatccatt
cgtgtctgtcgtgacgtcatcacacggagatcccttggttatgcctacgtgaattttcag
cagccggctgatgccgagcgtgctttggacactatgaactttgacatgctgaagggccgc
ccaattcgtatcatgtggtcgcagcgcgacccatcacttcgtaagtcaggagtgggcaac
gtcttcatcaagaatctggaccgaagcattgataataaagctatgtacgatacattctct
gcatttggcaacatactcagttgtaaagtagcgcaggacgagaccggtgagtctaaagga
tatggtttcgttcatttcgagactgaggaggctgccaacaagtctattgacaaggtcaac
ggtatgctgttgaacggcaagaaggtctacgttggtaaattcattccacgcaaagaacgc
gagaaggagctcggtgagaaggccaagctcttcacgaacgtctacgtcaagaacttcggc
gaggacatgactgacgagaaactaaaagacatgttcgagaagtacggaacaataaccagc
tacaaggtgatggccaaggacgatggaaaatcctgtggctttggtttcgtggccttcgag
gaccccgaggcagccgagcaagcagtccttgagctcaatggcaaggaaatcaccgagggc
aagtacatgtacgtgggtcgagcacagaagaaggctgaacgtcagcaagagttgaaacgc
aagtttgagcagctcaagattgagcgtttgaacagatatcaaggtgtcaatctgtacgtg
aaaaatctcgacgacacaatcgacgatgaacgtttgcgcaaggaattcaccacattcggc
acaatcacatcggccaaagtaatgttggaagacggtaggagcaagggctttggttttgtc
tgcttctcagcccctgaggaagccacaaaggcagtgacagagatgaatggacgtattgtg
ggtacaaagccactttacgttgcactggcgcaacgtaaggatgaaagaaaggctcattta
gcctctcagtacattcaaaggatgtcgaacctcaggatgcaacagatgggaccaatgtac
cagacaggaggtgctgggagcttcttcgtgcccactttgccacaaccccagagattctat
ggaccagcacagatggcccaggttcgtgccaccccacgatgggcagcacagccaaatcaa
gtgcgtccaaatgcacaaactggtagctctggattcgccacaatgcaagcgccattcaga
gcaactccaagagcaccaggtgctcaagctggagcaatgcgtaatgccatgtctgctcgt
ccaatcactggccagcaagctgtgggcaacattaatgcgcaaggaagagccatggctgga
gcttctgttggagtttctccggcacagaacagaccacccaattacaagtataatttgaat
gtcaggaatcctccgcaggccatggccatgcctcaacctgcacctgtccaacaagctgtg
catatccagggacaggagccactcactgcatctatgctcgctgctgctcttcctcaggaa
cagaaacagatgcttggggagagattgttcccactcattcaatgcatgtatcctcaactc
actggcaaaatcactggaatgctgctggagattgataattcggagctgctccacatgctc
gagcataatgagtcactcaaggctaaggttgaagaggctgtcgccgtactacaggcacat
caggctaaacaggccgtcaagaaagagtaa
DBGET
integrated database retrieval system
