Diachasma alloeum: 107048019
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Entry
107048019 CDS
T07663
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dam
Diachasma alloeum
Pathway
dam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107048019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dam03009
]
107048019
Ribosome biogenesis [BR:
dam03009
]
Eukaryotic type
Pre-60S particles
RNases
107048019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
107048019
NCBI-ProteinID:
XP_015126457
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MLPSTGYFKSINCPFYDSGSCDRPYCHFKHLRRDDVSNPAPSILGYTTIHEPEKTIESSE
GGENSGATPLPKTPNPEMIQQLVSDAVSKVLADQGVTDSETVSKDIVSKVVEGLKPTLAP
AIGKHSGVPQSITKPPCVYNPTPISELRKRHIAVPVYNPTRESKVSVKRKSTDDSAKPWL
SALPESIKNDQRRISEITYKPTAIVHDKDAVEGLNYIPTARSDDSNSSDYSKRKEAYYPK
SKKRREEYVPRKVKAPLQSVQQLEDMTLDSFDPEFNLLDDILIGNSKSLKNYESSSQDMY
NIEGKFSDEEIVDFTGEPEATEEVQKMEEDTREETIVTDELGQEETNKDDHEAEHNNISC
SNKSDEISEAKSLTKEKTTKSNHDDKSRRCSVSSESSRHSETHKSREHSNKENSTGKKSS
SSHKSKSSNSDKDRKSSHSRRDSKDHKKTSDSHRSSSSRHRESKSHSKSSSHSSRDKSHQ
SSSHGDKSSTSKENNHHKSSRHDKKKSSSSSRSKSSEKSSSKSSGRRSSSSSHKSKESKR
ISKSESNNAKDQSDHDSSNEAFDNFIGEELLQSSDSEHDVEEECLKIFQEYQVTEAPKSI
TTKQTKKPDEGVEEVGKKRVAHPSAEHSVVRNAGPTQPLKKAPNPQQRMYDRWRMMKEAA
ADKAAERAAKQMNPEREVNDEKIEVKSKIFGAVKTTPSESQVNGNGRVRIAHVPYAMSLA
LSKKKVVDATSKPVESKTVAQTTKGTPRVAHIPQTVPTLVRPEPLQVATQKFAINVRQYY
VNLMHDICVQIYTNGDDAAQRALREELACHERCKALSVYKNSCMLAAHRLRKEVDQSVPD
GSVPSASGMLSHDAVLAGKTKGSWSVVKVKKAATDFKGPALYSMLKKWIMTETQLRENGF
PRAHPDGPKGRAKYYATRNQPLLSKVPNERLCIRCGQAYMVDKRGFAVTEQNCIYHWGRK
FTIRGEGRYSCCQQYGSATGCSDAKNHVWDYVDYDNLRGYVSTLPKDGPGDPEEQGVYAL
DCEMTYTTQGLELTRVTVINEDCNVVYETLVKPDNPIIDYNTRFSGITEENMVGVTTSLL
DVQATLLTMFSDHTILVGHSLESDFKALKLIHNTVVDTSMMFPHKNGPPHKRALRNLCSE
YLRKIIQNDVGGHDSNEDAVACMELIHWKVKEEAKLQ
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcttccatcgacgggctacttcaaatcaataaactgtccgttttatgacagtggctcc
tgtgacaggccctattgccacttcaaacacttgcggagagatgacgtttcaaatccagcc
ccctcgatcctcggttacaccacaatccatgagcccgagaagaccatcgaatcaagcgag
gggggtgagaatagtggagccacccccctaccaaagactccaaatcctgagatgatacag
cagttagtttccgacgcagtcagcaaagttctggctgatcagggggtcacagattcagaa
acagtatctaaagacattgtttctaaagtagtcgagggtctgaagccaacattggcacca
gccattggtaaacacagtggtgtcccccagtctataacaaaacctccatgtgtatataat
ccaacgcctatatcagagctcagaaaacgacacattgcagtgcctgtctacaatccaacg
agggagagcaaagtttccgtgaagagaaaatccacagatgattcggcgaaaccgtggctc
agtgctctgcctgaatccattaaaaacgatcaaagaagaattagtgagataacttataaa
cccactgctatagttcacgacaaggatgctgttgaggggctgaattatattcccactgct
aggtcagatgacagtaattcgagtgattactccaagaggaaggaggcgtactacccgaag
tctaaaaaacgtcgagaggagtatgttcctaggaaggttaaagctcctcttcagtctgtg
cagcagcttgaagacatgaccctcgactcgtttgatccagagttcaatctgttggatgac
attctcattgggaattcgaagagtttgaagaactacgagagtagttcacaggatatgtac
aacattgagggtaaattttcggacgaggagattgtggatttcactggagagccagaagca
accgaggaagtacaaaaaatggaggaagataccagagaagagacgattgttaccgacgag
ctggggcaagaggaaaccaataaagacgaccatgaggcagaacacaataacattagttgc
agcaacaaaagtgacgaaatttctgaggcaaaaagcctcacaaaagagaagaccacgaaa
tcgaatcatgacgacaagtcgagaagatgttccgttagttcggagtcgtcgagacacagt
gagacacacaaatcgagagagcactcgaacaaggagaattcaacggggaaaaagtcctcg
agcagtcacaagagcaagagctccaacagtgataaggatagaaagagttcccatagtagg
cgagactccaaagatcacaaaaagacttctgattcacacagatcgtcatcaagcagacac
agagaaagcaagagtcacagtaaaagtagctcccacagttctagagataagtcacatcag
tcgagttctcacggggacaagtcatcgacttccaaagaaaataatcaccacaagtcgagt
aggcacgataagaagaaatcctcgagttcgtcacgttccaaatccagtgagaagtcgtcg
tcaaagtcctcggggcgacgaagctcgagctcgagtcacaagtccaaagaatcgaagaga
atatctaaatcagaatcaaataacgcgaaggatcagtcggatcatgactcgtccaacgag
gccttcgacaatttcatcggtgaggagctcttgcagtcttcagattctgagcacgatgtc
gaggaggagtgcctcaagatcttccaagaatatcaggtcaccgaggcgccaaaaagtatt
accacgaagcagacgaaaaaaccggatgagggcgttgaggaagtaggtaaaaaacgcgtc
gctcatccatcagcagaacactctgtagttcgcaatgctggacccactcagcccctcaag
aaggcacccaatccccagcagagaatgtacgatcgttggcgaatgatgaaggaggccgct
gctgacaaagctgccgagagagccgccaagcagatgaatcctgagagagaagtgaacgat
gaaaaaattgaggtgaagagtaaaatttttggagctgttaaaacaacgcccagtgaatct
caggtcaatggaaatggccgtgtgaggatagcacatgtaccttacgcaatgtctctggca
ctgtcgaaaaagaaagtagttgatgccacatcgaaaccagtggaatcaaagaccgttgcg
cagacgacaaaaggcactccacgtgtcgcccacatcccacaaacagtaccaacgctggtt
cgtccggagccattgcaagtggcaacccagaagttcgctataaatgtacgtcagtattac
gttaacctgatgcacgacatttgtgtacaaatatacaccaacggtgatgacgctgcacag
cgtgcactgcgcgaggagcttgcgtgtcacgagcgttgcaaagccctgtcagtttacaag
aactcgtgtatgctggctgctcacagactcaggaaggaagttgatcagagtgtgccagat
ggatctgtgccgtcagcaagtggaatgttatcacacgatgctgtgcttgctggaaaaaca
aagggctcttggagtgttgtcaaggtgaagaaggcagcgacagacttcaagggtccagct
ctctactctatgctcaaaaaatggataatgactgagacacagctgcgggaaaatggtttc
ccccgggcacatcctgacgggcccaaggggagggccaagtactatgcaacgaggaatcag
ccgttgctttcaaaagtgcctaatgagagactctgcattcggtgcgggcaggcctacatg
gtggacaaacggggctttgcggttacggaacagaactgtatttatcattggggtcgcaag
ttcacgatcaggggggagggaaggtacagctgttgccagcagtatggatcggccactggc
tgctctgatgccaaaaatcatgtctgggattatgttgattacgataatctacggggttat
gtttctacgttacctaaggatggtcctggcgacccggaggaacagggagtctatgctctc
gactgcgaaatgacgtacaccacgcaggggctggaattgacgagggtcactgttatcaat
gaggattgcaacgttgtttatgagacacttgtcaaaccggataatccgattattgattat
aacacgagattttcaggtataactgaggagaatatggtgggagtgacgacaagcctgctg
gacgttcaggcaactctattaacaatgttttcggatcatacgatattagtgggtcacagt
ttggagagtgatttcaaagcactaaagctcattcacaatactgttgtagatacaagtatg
atgtttccccataaaaatggaccaccccataagcgtgccctgagaaatttgtgctccgag
tatctacgtaaaatcattcagaatgatgtcggaggtcatgacagtaacgaggatgctgtc
gcttgtatggaactcatacactggaaagtcaaagaggaagccaaacttcagtga
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