Diachasma alloeum: 107048122
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Entry
107048122 CDS
T07663
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
dam
Diachasma alloeum
Pathway
dam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107048122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107048122
03036 Chromosome and associated proteins [BR:
dam03036
]
107048122
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107048122
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107048122
mRNA degradation factors
5'-3' decay
Decapping complex
107048122
Chromosome and associated proteins [BR:
dam03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107048122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA
CMS1
Motif
Other DBs
NCBI-GeneID:
107048122
NCBI-ProteinID:
XP_015126615
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MMTETHINSNHMLNSGLTSKSDHEKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNDFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDAK
RDVIQALVIVPTRELALQTSQICIELAKHMDVKVMVTTGGTNLRDDIMRIYQKVQVIIAT
PGRILDLMDKNVANMDHCRILVLDEADKLLSQDFKGMLDHVISRLPQERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIESELGTEIKPIPK
VIDPSLYVARPDDSNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaacgcatattaattccaatcacatgctgaattcgggtctgaccagtaag
tcagaccatgagaagatggacgatgtgggctggaaagcaaaacttaaaattccaccaaag
gacaaacgcatcaagacaagtgatgtcacagacacacgtggtaacgatttcgaagaattc
tgcttgaagcgagaacttttgatgggaatatttgagaaaggatgggagaaaccatcgcca
attcaagaagccagtataccaattgccctgtctggtaaagatattctggcccgtgccaag
aacggtacaggaaagactggagcttactcaatcccagtattggagcaggttgacgccaag
agagacgttatccaagcattagtcatagtgcctaccagagaattagcattgcagacatct
caaatctgtattgagctcgctaaacacatggatgttaaggttatggtgaccactggtgga
actaatctgcgtgatgacattatgaggatttaccaaaaagttcaagtgattattgcaaca
ccaggtcgtattctcgatctgatggacaaaaatgtcgccaacatggatcactgcagaatt
ttggtacttgacgaggctgacaaactcctatcacaagacttcaaaggcatgttggatcat
gttatttccagattaccccaggaacgacagatattgctgtattcagccacgtttcccctc
actgttaaacaattcatggaaaaacatttgagagatccatacgagattaacttgatggag
gagttgacacttaagggtgtcacacagtactacgcctttgttcaggaacgccagaaagtc
cactgcctcaatacattattttcaaaactccaaataacacagagtattatattctgcaac
tcaacgcagcgggttgaattgttggccaagaaaatcacagatttggggtattgctgctat
tacattcatgccaaaatggcacaagcacacagaaatcgtgtgttccatgattttcgcgct
ggcctatgccgaaatttggtaagcagtgacttgttcacgcgcggtattgacgtccaggct
gtgaacgttgtaataaactttgattttccaaaaatggctgagacctatctccaccgtatc
ggtcgctctggcagatttggccacttgggtattgccattaatctgataacttacgaggat
cgtttcaatctccatcgtattgagtctgagcttggtacagagatcaagccaattcccaaa
gtgatagatccaagcttatacgttgcaagaccagacgacagcaacagtatggaggaaggt
aatgtgtcgaagtag
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