Desulfovibrio aminophilus: ACEB74_14980
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Entry
ACEB74_14980 CDS
T11313
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dami Desulfovibrio aminophilus
Pathway
dami03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dami00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACEB74_14980 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dami03021
]
ACEB74_14980 (rho)
03019 Messenger RNA biogenesis [BR:
dami03019
]
ACEB74_14980 (rho)
Transcription machinery [BR:
dami03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACEB74_14980 (rho)
Messenger RNA biogenesis [BR:
dami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACEB74_14980 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
AAA
ATPase_2
AAA_14
AAA_2
AAA_25
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
XOI75179
LinkDB
All DBs
Position
complement(3147090..3148307)
Genome browser
AA seq
405 aa
AA seq
DB search
MSELMDMAARYNVENPSGLRKQELIFALLQACASQNGQIFGEGVLEILPDGFGFLRSPMY
SYMPGPDDIYVSPSQIRRFGLRKGDVISGQIRPPKEGERYFALLRVSEIGFEPPEYSKNL
VLFDNLTPIYPNKRFKMENGGENYSSRVIDLLSPIGCGQRGIIVAPPRTGKTMLLQTIAN
SINANHPEVYLIVLLIDERPEEVTDMERTVRAEVISSTFDEPPTRHVQVTEMVLEKAKRL
VERKRDVVILLDSITRLGRAYNAVTPSSGRVLSGGLDANAMQRPKRFFGAARNIEEGGSL
TIIATALIDTGSRMDEVIFEEFKGTGNMEIYLDRHLSEKRVFPAIDINRSGTRKEELLLE
EEVLNRVWILRKLLAPMNPIDSMEFLLGKMKGSKSNREFLNMMNK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactcatggacatggccgcccgttacaacgtggagaaccccagcggcctgcgc
aagcaggagctgatcttcgccctgctccaggcctgcgcctcgcagaacggccagatcttc
ggcgaaggcgtgctggaaatcctgcccgacggcttcggctttctccgctctcccatgtac
agctacatgccgggcccggacgacatctacgtctcgccctcccagatccgccgtttcggc
ctgcgcaagggcgacgtcatctccggccagatccgtccgcccaaggagggtgaacgctac
ttcgccctgctgcgcgtctcggagatcggcttcgagccgccggagtactccaagaatctg
gtcctcttcgacaacctcaccccgatctacccgaacaaacgcttcaaaatggaaaacggc
ggcgagaactattcctcgcgcgtcatcgacctgctctcgcccatcggctgcggccagcgc
ggcatcatcgtggccccgccccgcaccggcaagaccatgctcctgcagaccatcgccaac
tccatcaacgccaaccaccccgaggtctacctcatcgtcctgctcatcgacgagcggccc
gaggaagtgaccgacatggagcgcacggtccgcgccgaagtcatcagctccaccttcgac
gagccgccgacccgccacgtgcaggtcacggagatggtcctggagaaggccaaacgccta
gtggaacgcaaacgcgacgtggtcatcctgctcgactccatcacccgtctcggccgggcc
tacaacgccgtgaccccgtcctccggccgcgtgctctccggcggtctggacgccaacgcc
atgcagcggcccaagcgcttcttcggcgcggcccgcaacatcgaggaaggcggcagcctg
accatcatcgccaccgcgctcatcgacaccggttcacgcatggacgaggtcatcttcgag
gagttcaagggcaccggcaacatggagatatacctggaccgccacctctccgagaagcgc
gtgttcccggccatcgacatcaaccgttccggcacccgcaaggaggagctgctcctggag
gaggaagtcctcaaccgggtctggatcctgcgcaagctcctcgcgcccatgaaccccatc
gacagcatggagttcctcctgggcaagatgaaaggctccaagagcaaccgcgaattcctg
aacatgatgaacaagtag
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integrated database retrieval system
