Drosophila ananassae: 6493237
Help
Entry
6493237 CDS
T01059
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
dan
Drosophila ananassae
Pathway
dan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6493237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dan03041
]
6493237
Enzymes [BR:
dan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6493237
Spliceosome [BR:
dan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6493237
Complex C
U5 SnRNP specific factors
6493237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
AAA_11
Motif
Other DBs
NCBI-GeneID:
6493237
NCBI-ProteinID:
XP_001957333
UniProt:
B3M9U8
LinkDB
All DBs
Position
Unknown
AA seq
2142 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVCSLVGKLDGTRMGDRYQRTK
PEKTEERKVKRQKRDEAQYDFERMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVLLSFI
QEALGDQPRDILCGAADEILAVLKNDRLKDRERKRDVDSLLGSVTDERFALLVNLGKKIT
DFGSEAVNALTAAPNNEEQIDETYGINVQFEESEEESDNDMYGEIRDDDAQDEGEEARID
HTLHAENLANEEAANNVKKDRTLHPLDIDAYWLQRCLSKFYKDAMVSQSKAADVLKILKD
AADERDCENQLVLLLGYDCFDFIKQLKLNRQMILYCTMLASAQTDSERQRIREKMRGNSA
LAKILRQLDTGKAEEQEEGETRGSKRGKGDAEDGGAAAAGQVAGVRQLLELDELAFTQGS
HFMANKRCQLPDGSYRKQRKGYEEVHVPALKPVPFDDNEELQPVDKLPKYVQPVFEGFKT
LNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLTMMREIGKHINEDGTINAQDFKIIY
VAPMKSLVQEMVGNFGRRLSCYNLTVSELTGDHQLTREQIAATQVIVCTPEKWDIITRKG
GERTFVSLVRLVIIDEIHLLHDERGPVLEALVARTIRNIETTQEEVRLVGLSATLPNYQD
VATFLRVKPDKGLFYFDNSYRPVSLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQ
VLVFVHSRKETGKTARAVRDMCLEQDTLGSFLREGSASMEVLRTEAEQVKNTELKELLPY
GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR
WVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFISKLPDM
LNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTA
ACCLERSGLIKYERKTGHFQVTDLGRIASHYYLTHETMLTYNQLLKQTLSEIELFRVFSL
SSEFRHISVREEEKLELQKLMERVPIPIKESIEEHSAKVNVLLQAYISQLKLEGFALMSD
MVFITQSAARLMRAIFEIVLTRGWAQLADKTLTLCKMIDRRMWQSMTPLRQFKKMPDEIA
KKLEKKHFPWARLYDLEPHELGELIRVPKLGKTIHKFVHQFPKLELSTHIQPITRGTLRV
ELTITPDFQWDEKVHGASEGFWVLIEDVDSELILHHEFFLLKQKYSQDEHQLKFFVPVFE
PLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNMPPTELLDLQPLPISALRQPKFEAF
YSQRFPQFNPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEFAIMRLFTTQSDARCVYLV
SQEALADLVFADWHGKFGSLDIKVVKLTGETGTDLKLIAKGQLVITTADKWDVLSRRWKQ
RKNVQLVNLFIVDELQLVGGEEGPVLEIVCSRMRYISSQIEKQIRIVALSASLTDARDVA
QWLGCNPNATFNFHPSVRPIPLELHIQGFNVTHNATRIATMSKPVYNAILKYSSHKPVIV
FVSSRKQARLTAIDVLTYAASDLQPNRFFHAEEEDIKPFLERMTDKTLKETLAQGVAYLH
EGLSASDHRLVEQLFDSGAVQVAVVSKDLCWGMSISAHLVIIMDTQFYNGKNHSYEDYPI
TDVLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVV
TKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKC
ISVEDDMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKVRGLLEIISSAAEYEDVVVR
HHEEQVLRTLSQRLPNKLTGPNETAPKFNDPHIKTNLLLQAHLSRLQLGPELQGDTEQIL
SKAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLRQLPHFSAEIVKRCTE
KKIETVFDIMELEDEDRSRLLQLSDSQMADVARFCNRYPNIELNYEVVDKDRINSGSTVN
VVVQLEREDEVTGPVIAPFFPQKREEGWWVVIGDPKSNSLLSIKRLTLQQKAKVKLDFVA
PSPGKHDYTLYYMSDSYLGCDQEYKFSIEVGDFQSESESESD
NT seq
6429 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagcagcacgtcagctgcagtacgagtacaaggcgaactccaatcttgtg
ctgcaagccgatgtccgactcatcgaacgaccacgtcgcgatgaggctactggtgaggtg
tgctccctagtgggaaaactggacggcacccggatgggcgatcggtaccagcgcaccaag
ccggagaagacagaggagcgcaaggtgaagcggcagaagcgggacgaggctcagtacgac
ttcgagcgcatgaagggtgccacgctgctgtccgagggcatcgatgagatggtgggcata
gtctatcgccccaaaacgcaggaaacccgtcagacctacgaggtcctgttgagcttcatc
caggaggccctcggggaccagcccagggatatcctgtgcggagccgctgacgagatcctg
gccgtactaaaaaatgatcgcctgaaggatcgggagcgcaagagggacgtggacagtctg
ttgggatcagtgaccgatgagagatttgcattgctggtcaatctcggcaagaagataaca
gactttggcagtgaggcagtcaatgccttgactgcagctccgaacaacgaggagcagatc
gacgagacatacggcatcaacgtgcagttcgaggagtctgaggaggagagcgacaacgac
atgtacggcgagatccgcgatgacgacgcccaggatgagggcgaagaggctcggattgat
cacacactgcacgccgaaaacctggccaacgaagaggctgccaacaatgtgaagaaagat
cgcaccctccatcctctggacattgacgcctactggttgcaacgttgcctgagcaagttc
tacaaggatgccatggtgtcgcagagtaaggcagccgatgtgcttaagatcctgaaagac
gccgccgatgagcgcgactgcgagaaccagttggtgcttctgctcgggtatgactgcttt
gacttcataaaacagctgaagcttaaccgccagatgattctctactgcacaatgctggca
tcggctcagacggacagtgagcggcagagaatccgcgaaaagatgcgcggcaactcagca
ctggcgaagattctcaggcaattggataccggaaaggccgaagaacaggaggagggcgaa
accagaggcagcaaacgtggcaagggcgatgccgaagatggtggagctgctgcagcaggt
caggtggccggcgtacgacagcttctagagttggatgagctggccttcacccaaggatcc
cacttcatggccaacaagcgctgtcagcttcccgatggttcctacaggaaacagcgcaag
ggctacgaggaggtgcatgtgcctgccctgaagccagtgcccttcgatgacaacgaggag
ctgcagcccgtggacaagcttcccaagtatgttcaacccgttttcgaaggctttaaaact
ctcaatcgcatccagagccgcctgtacaaagccgccctagacagtgacgaaaacatgctg
ctgtgtgcgcccactggagcgggtaaaaccaatgtagccctgctcaccatgatgcgagag
atcggcaagcacataaacgaggacggcaccatcaatgcccaggactttaagatcatttac
gtggctcccatgaagtcgttggtgcaggaaatggtgggtaacttcggtaggcgcctttcc
tgctacaatcttaccgtttccgagctcacaggagatcaccagctgaccagggagcagatt
gccgccacccaggtgattgtgtgcacgccggaaaagtgggatatcatcactcgaaagggc
ggagagcgcacattcgtcagtctggtgcgattggtcattattgatgaaatccatttgctg
cacgatgaacgtggtccggttttggaagcactggtggctcgtaccattaggaacattgag
accacgcaggaggaggtgcgactggtgggattgtctgctactctgccgaactaccaagat
gtggccaccttcttgagagtgaagccggacaaagggctcttctacttcgacaacagctac
cggccggtgtccctggagcagcagtacatcggtgtgacggagaagaaggctctgaagcgg
ttccaagtcatgaacgagattgtgtacgagaagaccatggagcatgctggccggaaccaa
gtcttggtgtttgtgcactcccgcaaggagaccggcaaaacagccagggcagtgagggac
atgtgcctggaacaggataccctcggcagctttcttagagaaggatctgccagtatggaa
gtgctgcgcacggaggcagaacaggttaagaacactgagctgaaggaacttctcccctat
ggcttcgccatccatcatgccggaatgacgcgtgtggatcgtaccctggtggaggatctc
ttcgcggatcggcacatccaggtgctagtgtccactgccactttggcctggggtgtgaat
ctgcccgcgcacacggtaatcatcaagggaacccaggtctacaacccggagaaggggcgc
tgggtggagctaagcgcgttggatgttctgcagatgttgggacgcgcgggtcggccccag
tacgacaccaagggtgagggcatccttataaccaaccacagcgagctgcagttctatctc
tccctgctcaaccagcagctgcccatcgagtcccagtttatatccaagctgccagacatg
ctgaacgctgagattgtgctgggaactgtccagcatcttcaggatgctgtcaactggctg
ggctacacttatttgtacatccgtatgctgagaaatccgactctgtacggagtatcccat
gatgctatcaaagcagatcccttgctggaacaacatcgggcggatcttctgcacaccgcc
gcctgctgcctggaaaggagcggcctcattaagtacgaacgcaagactggccacttccag
gtgaccgatttgggacgcattgcctcgcattactacctcacccacgaaaccatgttgacc
tacaaccagctcctgaagcaaactcttagcgagatcgagctattccgcgtcttttcgttg
tcctccgaattccggcacatctcggtaagggaggaggagaaactggagctgcagaagctg
atggaaagagtgcccatacccatcaaggaatcaattgaggaacacagcgcaaaggtgaat
gttctgctccaggcctacatatcccagctgaagctggagggtttcgccttgatgtccgac
atggttttcattacccagtccgcagcccgtttgatgcgggccattttcgagatcgttctg
accagaggatgggctcagttggcggacaaaacactgacgctctgcaagatgatcgatcgc
aggatgtggcagtctatgacgccactcaggcagttcaagaagatgcccgatgaaatagcc
aagaagctggagaagaaacacttcccatgggccaggctctatgatttggagccccatgag
ctgggtgagctcataagggtgcccaaattgggcaaaaccatacacaagtttgtgcatcag
ttcccgaaactggagctctccactcacatccaaccgattactaggggaactctcagagtg
gagctcacgatcactccggatttccagtgggatgaaaaagtccacggggcgtctgagggc
ttttgggtgctgatcgaggatgtagactctgagctcatcttgcaccacgagttcttcctg
ctgaagcagaagtattcccaggacgagcaccagctgaagttcttcgtgcccgttttcgag
cccctgccgccgcagtacttcctccgaatcgtttctgatcggtggatcggggcagagacc
caattgcccgtgtcattccgccatctcatcctgcccgagaagaacatgccgccgacagag
cttctggatctgcagccgctgcccatcagtgctctccggcagcccaagttcgaggcattc
tattcgcagcgattcccgcagttcaatcccatccagacgcaggtcttcaatgccgtttac
aacagcgatgagaacgtattcgtgggagcccccactggctcgggaaagatgaccattgcc
gagtttgccatcatgcgcctgtttaccacgcagtcggatgcgagatgtgtgtacttggtt
tcccaggaggctctggcggatctggtctttgccgattggcacggaaagttcggctccctg
gacattaaggtggtgaagctaacgggagaaacgggaacggatctgaagctgatagccaag
ggccaactggtgatcaccacggcggacaagtgggatgtgctctctcgcagatggaagcag
aggaagaacgtccagctggtgaacctcttcattgtggatgaactgcagctggtgggaggt
gaagaaggcccggtcttggagatcgtctgctcccgaatgcgctacataagctcacagatt
gaaaaacagatccggatagtggccctgtcagcctctctgacggacgcaagggatgtggcc
cagtggctgggatgcaatcccaatgccaccttcaacttccacccgagtgtccggcccatt
cctttggagttgcacatccagggattcaatgtcacgcacaacgccactaggatcgccacc
atgtccaagccggtgtacaatgccattttgaaatacagttcccacaagccggtcatcgtg
tttgtttcgtccaggaagcaggcgaggctcacggctattgacgtcctgacctacgctgcc
tcggatttgcagccgaatcgtttcttccacgcggaggaggaggacatcaagcccttcctg
gagcgaatgacggataagactttaaaggaaaccctagcccagggagtcgcctatctgcat
gagggtctttccgcctccgatcaccgcttggtggagcagctcttcgattcgggagcggtg
caagtggccgtggtctcgaaggatctctgctggggcatgagcatctccgcgcatttggtg
atcattatggacacgcagttctacaatggcaagaaccattcctacgaggactatcccatc
acggacgtgctgcagatgattggcagggcgaatcgacccaatgaggacgcggatgccaag
tgcgtgctgatgtgccagagcagcaagaaggacttctttaagaagttcatcaacgagccg
ttgcccatcgagagtcatttggatcaccgcatgcacgatcatttcaacgccgaggtggtg
accaagacaattgaaaacaagcaggatgccgtggactacctcacctggacgttcctctac
cgaaggctcacgcagaatcccaactactacaatctgcagggtgtcacgcatcgccacctc
tccgatcatctgtccgagctcgtggagaataccctgagcgacttggaacaatccaagtgt
atcagcgttgaggacgacatggacactctgcccctcaatctgggcatgattgcggcctac
tattacataaactacacaacaattgaactcttcagtttgtcgctgaacagcaagaccaaa
gtgcgaggcctgctggagatcatctcgtcggccgccgagtacgaggatgtggtagttaga
caccatgaagaacaagtcctgcgcactctctcccagcgcctgccaaacaagctcactggc
cccaatgaaacggcacccaaattcaatgatccgcatatcaagaccaatttgctgctgcag
gcacatctttcgcgtctgcaactgggacctgaactccagggcgatacggagcagatcctg
agcaaggccatccgtctcatccaagcctgtgtggatgtgctgagctcgaacggctggctc
tccccggcggtggctgccatggagctggctcagatggttacccaggcaatgtggagcaag
gactcgtacctgcgacagctaccgcactttagtgccgaaatcgtcaagcggtgcacagaa
aagaaaatcgaaaccgttttcgacatcatggagctagaggatgaggaccgttcgcgtctg
ctgcagctttctgattcgcaaatggcagatgtagctcgcttctgtaatcgctatcccaac
atcgagctcaactatgaggtggtggacaaggatcgcattaactctggctcaacggtcaat
gtggtggttcaactggaacgcgaggacgaagtcactggcccagttattgcgcccttcttc
ccccagaaacgcgaagagggctggtgggtcgttatcggtgatccgaagtccaactccctg
ctctccatcaagcgcctcacgctccagcagaaggccaaggtcaagctggactttgtggcg
cccagtccgggcaagcatgattacaccttgtactacatgagtgattcctacttgggctgc
gatcaggagtacaagttctccatcgaggtgggcgatttccagtcggaaagcgagagcgag
tcggattaa
DBGET
integrated database retrieval system
