Drosophila ananassae: 6493604
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Entry
6493604 CDS
T01059
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dan
Drosophila ananassae
Pathway
dan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
6493604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dan03400
]
6493604
DNA repair and recombination proteins [BR:
dan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
6493604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
6493604
NCBI-ProteinID:
XP_001958088
UniProt:
B3M729
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MSKKLNTSVGGTPTNTLFNYFTKSPAVDKKKLTPSGKTDSAVKSEVAEKENLKNGQIKKP
ETPKETKPAAKKKLAMSDEEAPKKRKRIQQLESESEEEMEETKSEDDFSEACSDYEPDAN
EDSDDSASSGDEEVEPSDASMSETSPSPKKSRKKTKTINNNDIEPTSKKLKLDPPEALVE
GSTFQEKLKNLQSNAKKDAAYDEIVTTTSNLDEPVIWPHQKLEFLQPDKIKDKAGRRPDH
PDYDSSTLHVPDKFLNSLSPGVRQWWVLKSDNYDCVLFFKVGKFYELYHMDADVGVNELG
FTYMRGEFAHSGFPEISFDKMSNILIDRGYKVARVEQTETPDMMTERCKRIKATKFDKVV
AREICQITNRGTQVFGSQCKIGPNHQPNYMLALVEQDLGTTSRYGVCFIDTSIGDFHLGE
FEDDKNCSRLLTLLSHNMPVLLLNEKSALSLRTQQIVRTVLGGILKEQVPANGSQACNAE
KTLKLLAERYYAGSGSDDNWPLVLRTMQSDLDHLGLTPNDDYKMALKALGECIFFIHKCK
LEPKVLPMARYHMYVPPDQIADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHSLLATLD
HCCTKFGKRLLHHWLCAPSCDVAVIKERQEAIGELIRLPSELQEMRALLAPMPDFERNLA
QIHLFGNKQLKEMNHPDSRAILFEEKIYNKHKLLGFMAVLKGFNALTKIPMMFHQCETDL
LKRITQLPESGGSFPDLSKELKYFATAFDHDAAAKTGVIAPQPGMDAEYDAAMDGIAEIE
KRLKTYLEEQERHFGCRIAYFGSDKKRYQLDVPETHAHKANKSYSLEGQTKGKKPCRRYT
TAETRALLKDMQQAEETRNMVLKDLARRLFEKFSNHYEQWKQCIDCVANLDVLGSLAEYA
GQQMVICVPELVSGAEQPFIQLEEGYHPCVNASTYIPNGLELGTKSEAPLSLLTGPNMGG
KSTLMRELGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNETSL
ILKHATCHSLVLLDELGRGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHNDK
RITLGHMACMVENEDNEDPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYEL
SKKVEAIALQRKITAKIVAAAGGKESSKTEKLNVLKDLLQQLKKCHV
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaagttgaacacgagtgtgggcggaacgccaacaaacaccttgtttaattac
tttacaaaatcgccagcagttgacaaaaagaagttgacgcccagcggcaaaacagattct
gcagttaaatctgaggttgccgaaaaggagaatctcaaaaatgggcaaattaaaaagccg
gagacaccaaaggagactaaaccggcggccaagaaaaagctggccatgtccgatgaagag
gcaccaaaaaaaaggaagcgcattcagcaactagaatcggagagcgaagaggagatggag
gaaaccaaatctgaagatgacttctcggaggcgtgctccgactacgaaccagatgccaat
gaggatagtgatgatagtgccagcagcggtgacgaggaggtggaacccagcgatgccagc
atgtctgagaccagccccagtcccaagaagtctcggaagaagaccaagaccattaacaac
aacgatatcgagcccacgagcaagaaacttaagctggatcccccagaggcattggttgag
ggttctaccttccaagaaaagctgaagaatctgcagagcaacgccaagaaggacgcagct
tacgacgaaatagtgaccaccacttcgaatttggatgagcctgtgatatggccacatcag
aaattggagttcctgcagccggataagatcaaggacaaagctggcagacgtcctgaccat
ccagattacgatagcagcaccttgcacgttccagataagttcctaaattccctatcccca
ggtgttcgccagtggtgggtcctaaaatccgacaactacgactgcgttctgttcttcaaa
gtgggaaagttctacgagttgtatcacatggatgcggatgtgggcgtcaacgagctagga
ttcacatacatgcgcggggagtttgctcactcgggctttccagaaatatctttcgacaaa
atgtccaacatcctcatcgacagaggatacaaggtggctcgagtggaacaaacggaaact
ccggacatgatgactgagcggtgcaagcgtattaaggccactaagttcgacaaagtagtg
gctcgtgagatctgccagatcaccaaccgtggcactcaggtgtttggttcgcagtgcaag
atcggccccaatcatcagcccaactatatgttggccctggtggagcaagatctgggcact
acaagccgctatggggtgtgctttatagacacctccattggggatttccatttgggcgag
ttcgaggatgacaagaattgttcccgtcttcttaccctcctctcgcataatatgcctgtt
ttgctccttaatgaaaagtccgcgttgagccttcgcacgcaacagattgtgcgcactgtc
ttggggggaatactcaaggaacaggttccagccaatggatcccaagcctgcaacgctgag
aagacacttaagctcctggcagagcgctattatgctggaagtggttcagacgataattgg
ccattggttcttcgaacaatgcagtcggatttggaccacctgggactcacaccgaacgat
gactacaaaatggctctgaaagcacttggcgagtgcatcttcttcatccacaagtgcaag
ctggagccaaaggtgttgccgatggcgcggtatcacatgtatgtgccaccagatcagatt
gcggatgccaaaccagcagtagcctccactttgaggcgttctcacatggtgctggatgcc
acaactctgtcgaacttgaggatcataggggaggagcacagccttctggccactttggac
cactgttgcactaaatttgggaagagacttctgcaccactggctctgtgccccgagttgc
gacgtggctgttataaaggaacgacaggaagccataggagagctgattcgcctgcccagc
gagctgcaggagatgcgcgctttgctcgctccgatgccggatttcgaacggaatctggca
cagattcatctcttcggcaacaaacaactgaaggagatgaaccatccagattccagggcc
atcctctttgaggagaaaatctacaacaaacacaagctactgggtttcatggccgttctg
aagggcttcaatgccttaacgaaaattccgatgatgttccatcaatgcgagacagatttg
ttgaagaggattacccaactgccagaatccggaggatcctttcccgatctcagcaaggag
ctgaagtacttcgccaccgctttcgatcacgatgctgcagccaagactggcgtgattgct
cctcagccgggcatggatgcggaatatgatgcagctatggatgggattgcggagattgag
aaacgtctgaagacatatctggaggagcaagagcgccactttgggtgtcgcattgcctac
tttggatcggacaagaagcgctaccagttggatgtacccgaaacacatgcccacaaggcc
aacaaatcctattccctggagggtcagaccaagggaaagaagccctgccgccgatacacc
accgcggaaacacgggctctgctcaaggacatgcagcaggcggaggagaccaggaatatg
gtactgaaggatttggcacgacgccttttcgagaagttctccaatcactatgagcagtgg
aagcagtgcatcgattgtgtggctaatctggatgtcctgggctccctggcggagtatgcg
ggccaacaaatggtcatctgtgtgccggagctggtctctggggcggagcaaccatttata
cagcttgaagagggctaccatccttgtgtgaacgcctccacttatattcccaacggtctc
gaattgggaaccaagtcggaggcaccgctttctctgcttacaggtcccaatatgggtggc
aagagtactttgatgcgggaactgggattgttggtgatcatggcccagattggagctcac
atcccggcagccagttgccgcctctcgttggtggacagaatctttaccagactcggtgct
caggacgatatcctggctgggcacagtaccttcctcgtggaactcaatgaaacctccctg
attctgaagcatgctacttgccattctctggtgttgctcgatgaactgggcaggggaact
gctacctatgatggcactgccattgcagcttctgtcgtcaattttctggccaatctcaag
tgccgaactctgttctccacccactaccacaacctgattgatttcttccacaacgataag
aggataacccttggtcacatggcgtgcatggtggagaatgaggacaatgaagatcctacc
caggaaacggttacgttcctttacaagtacacagctggggcctgtcctaagtcgtatgga
tttaatgcggccaagttagctggaatgcctcagggaatcatcaagcgagcttatgagctt
tccaagaaagtggaggccatcgctctgcagcgcaagattacagcaaagattgtagctgcc
gctggaggaaaagagagttccaaaacggagaaactgaatgttctgaaggacttgctgcag
caattaaaaaagtgtcatgtttag
DBGET
integrated database retrieval system
