Drosophila ananassae: 6495348
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Entry
6495348 CDS
T01059
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X2
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dan
Drosophila ananassae
Pathway
dan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6495348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dan03019
]
6495348
Messenger RNA biogenesis [BR:
dan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6495348
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6495348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_1st
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-GeneID:
6495348
NCBI-ProteinID:
XP_001958629
UniProt:
B3ME56
LinkDB
All DBs
Position
Unknown
AA seq
2522 aa
AA seq
DB search
MNVESQLKTPLTHIRNLVKHVNKRNFNETCEHIKQFVKEHGLEADRSSLRHLFSVINFSD
ASPPTVTVQLQAKLLGAQLQRQLQSSSFVSNICFAFDQYFVINQKSLKPAAVADLVSHVS
RLTGINKLCECIFALAVTHSSHPELRKSAKNNLEVSLPELINSYLGNNNSSAATSGLQEI
SFDLLQYLLCCLSDYVKPQLEQEFLVKLREEFPRQAVPLVLAPFLYGTTTATAATVAGAG
ASETDAEAETTTASNSNSSSSEADALNEVGIEDIYDHLSEIIFTNQGKNNIMDTSWINLI
HEIGYEFTSSVEECKNHLCSRERERAEVQAKDVAKIVGLMCRRHSSLLDCNVNLPTPANF
WPGQAQGQSQGGQGAASNSSGSSTQTQSSTQQQQQQQGTGNSNNNDGAEGNTSSDKKDKK
ETTEATQTWKPDVFVQALKEVVPQINWKDVCLELDHPEFVLKDRIGLDLLLTILRLATGS
SLFPHPECIYRHWANTEGQLSLITTMLKNPDLFSFSDFVFSQPALDVLKTAPDAENKEIS
AWKSLHLVEVLLSIADKGYYTQVHEIFKFPAQNCPDVLFLALLHINPPLSPLRLDLFNQL
IPTFLGNHPNSNVILASAWSSTNFQLRPNIMNAMSEWYLRGNDFDQVKLSRILDLAQDLK
ALSSLLNARSFLFIIDLACLASRREYLKLEKWLTDKIRDHGEPFMQAMIKVLLRRCPQVA
NAKVPEDQLPPKQAQLLPETVTTMINCLQTCINNCMQPEMVEMIMQMTANVAIMANKARA
QQQPGLVPPPPPNMLRGHRGMDLSGGIVPPPPQQPFSGNLNAQMFAPGMDPLTNMSNNLA
GLNLSGPNGGFNFGNMLTSPSRLMNPGASPYPLNPMQMPQAPPPPNVGNLGRMLPGGPQQ
PTPTPTPTAPNPTNPVMADLQIPVSKEVEDEVNSYFQRIYNHQPNPTLSIDEVLDILQRF
KESSNRREQEVFLCMLRNLFEEYRFFCQYPEKELQITAQLFGGIIDRNLVPTFVALGLSL
RCVLDALRKPEGNKLFYFGITALDRFRTRLHTYNKYCEHIRSIPHFSDFPPHLIQYVEYG
MHGQEPPAQKLIGLSNTIPSAISSGPPTEALFRANSMAGNVPGGTLGSGSKSAVAVSHAT
RMKSIANATNIDTLLVANQEEKVTVPPEPVQDKTAFIFNNLSQLNIPQKCEEIKEIMTKE
YWPWLAQYLVLKRASMEFNFHTLYYNFLDALKNGEINRFVTKETLRNIKVLLRSDKGVIN
FSDRSLLKNLGHWLGMMTLGRNRPILQLDLDLKSLLAEAYHKGQQELLFVVPFVAKILES
SAKSRIFRSPNPWTMGIMYVLGELHQEPELKLNLKFEIEVLCKTLNLELAKLRPVIYLKD
PTRALLIDQQMSQPKPKQPEPIAAAPALPSQQPSPAQAPQQPPPPQQQQAPPPPPPAEVD
PQAAAAAMMVGSGGSGANSTPGSVASPNLPTDPSQVVLPPPEPRYSYVDVNVSNFQLIAQ
HLILPPNIPFLHANPGIKHIVINAVERTITDWLQPVVDRSIRIACATTEQIIRKDFALDA
DENRMRTAAHQMVRNLAAGMAMITGKDEIARAISQNLHKAFVSSLSGMPSLTEIQAAAMQ
LANENVELVCAFIQKTSAEKAAAEIDRRLSTDFETRKIAREEGNRFVDAQILSYQQERLP
EAVRIKVGPAPATLYAVYSEFARSIPGFQQMSDRDIALFVPKPQDLPPPNVFANDESSMV
YAEVASKMEAFMNTAIGVPSLQVQASKMHMLLNALMSTRRQRDQESAFNLLTRAVEGLTE
GLVNVPEHIEQMKLYQNIHLRILSLLQNSFGAPNTERAVTKCFFDIREEVRYNVEAARSL
ITSHFVNLNQFDGMLRDCMDNGNNYVAISFGIALLERLIMEDRAINIVQDNEFMATVELL
GRLTQHRHRYPECIVNAIETLWSGNFNSSSDFSPFNASERYLAGASHYIHSGMHHSCDTD
DPPGLQEKTEFLLKDWVALYTQQNQQSTRDARNFGAFVQKMNTYGILKTDDLITRFFRQA
THICTDVVYRMFAEPNLQLNQAKNKIFQWIDAFVHLIAMLVRHSGEAGNPTTKINLLNKV
LGIVLGTLLKDQEMRGTSFQQVGYHRFFMMLFMELCSADMILESLMHSIVSAFAYTYHLL
NPSVAPGFCFAWLELISHRVFLGRILVQIPGQKGWPLYAQLLQDLFKYLAPFLRNTELGK
PVQLLYKGTLRVLLVLLHDFPEFLCDYHFGFCDTIPPNCVQMRNIILSAFPRNMRLPDPF
TPNLKVDMLSDSSNAPKVSSSYIMNIQPPNFKKDLDSYLKARAPVTFLSELRGHLQVTSE
PGTRYNMTLMNALVMYVGTQAIALIRNKNFVPNTSNIAHSAHMDIFQNLAVDLDTEGRYL
FLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLIT
FIELIKNPIYKFWDHDFVHCAPEITKLFESVARSCLAKSNPPQQLNMAPVVDGEGQEVAN
IN
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagagagccaactgaagacaccgctaacgcacatacgcaatctggtcaaacac
gtgaacaagcgaaattttaatgaaacctgcgagcatataaagcagttcgttaaagagcac
ggcctggaagcggatcgcagcagtctgcgtcacctgttttccgtgatcaacttcagcgac
gcctcaccgccaacggttaccgttcagctgcaggccaagctattgggagcccagttgcag
cgtcagttgcagagctcatcgtttgtctccaacatctgcttcgctttcgatcagtacttt
gttattaatcagaagtctttgaagccggcagctgttgcggatctcgttagccacgtgtcg
cgtctgaccggcatcaacaagctctgtgagtgcatctttgcgttggctgtgacccattct
tcgcatccggagcttaggaagtccgcgaaaaacaacttggaagtctcccttcccgagcta
atcaactcctatttgggaaacaacaatagcagtgcagcgaccagtggccttcaagagatc
tcgttcgatttactgcagtatctgctgtgctgtctcagcgattacgtgaaaccgcaactg
gaacaagagtttctggttaagttacgcgaggaatttccgcgccaagcggtgccactcgtt
cttgctccgttcctttacggcacgacgacggcgacggcggcgacggttgcgggagcaggt
gccagtgaaacggatgcggaggccgaaacgacgacggccagcaacagcaacagctccagt
tccgaggcggatgctctaaacgaggtgggaattgaggatatctatgaccatttaagcgag
ataatatttacaaaccaggggaaaaataatattatggacacatcctggattaatttaatc
catgaaatcggttacgaatttacatcgagcgttgaagagtgcaagaatcatttgtgttcc
cgcgaacgagaacgcgctgaagttcaggccaaagatgtcgccaagattgtgggtcttatg
tgtcggcggcactcatcgctgctcgattgtaatgtaaacctaccaacgccagctaatttc
tggccaggccaggctcaaggacagagtcagggtggacagggagctgccagtaatagtagc
ggatcctcgacccagacccagagctctactcaacaacaacagcaacagcagggcaccggc
aacagtaacaacaacgatggcgccgaaggcaatacgtcaagtgataaaaaggacaaaaag
gagacgacggaagcaacacaaacatggaagccggatgtctttgtgcaggccctcaaggag
gtggtgccgcagatcaactggaaggacgtgtgtctggaactcgaccatccagagtttgtg
ctgaaagatcgcattggtttggatctccttctgactatcctgaggttggctactggttcc
agtttgttcccacatccagaatgcatttaccgccactgggcgaacacggaggggcagctg
tcgctgataacaaccatgctcaagaatccggatctcttctctttctccgactttgtgttc
agccagccagctctggacgtcctcaagactgccccggatgcggaaaacaaggagatatcc
gcgtggaagtccctgcatctcgtagaggtgttgctgtcgattgcggacaagggatactac
acccaagtgcatgagatttttaagtttcccgctcagaactgtccggatgtgctgtttctg
gccttgctgcacattaaccctccgctatcgccgttgcgactggatctgtttaaccagctg
atacccacgtttctgggcaatcatccgaactcgaacgtcatactggccagcgcgtggagc
tccaccaacttccagctccggccgaacatcatgaacgccatgtccgagtggtacctgagg
ggcaacgacttcgaccaggtgaagctgtcgcggatcctagacctggcccaggacttgaag
gcgttatcctctttgcttaacgctcgatccttcctgttcatcatcgacctggcatgcctt
gcctcccggcgggagtacctgaagctggagaaatggctaaccgacaagattagagaccac
ggcgagccgtttatgcaggccatgatcaaggtgctgctccggcgctgtccgcaggtggcc
aacgccaaagtacccgaggaccagctgccccctaaacaggctcagctcttgcccgagacg
gtcaccacgatgatcaactgcctgcagacgtgcatcaacaactgcatgcagccggagatg
gtcgaaatgattatgcagatgacggcgaacgtcgccataatggccaataaggctcgtgcc
cagcagcaaccgggactagttccaccgcccccgccgaatatgttgcgtggccatcgtggc
atggatttgtcaggcggtattgtgcccccgccgccgcaacagcctttctccgggaacctt
aacgcccagatgttcgctcctggcatggatccgctcacgaacatgtccaacaacctggcc
gggcttaatctgagtggcccgaacgggggatttaacttcggcaacatgctaacttcgcca
tcacgattgatgaatccgggagccagtccttatccgctgaatcccatgcagatgccgcag
gctccgccgccacccaatgtcggcaatttgggcaggatgctgccaggtggcccccaacaa
ccgactcccacgcccacgccaacggccccgaatcccaccaacccggtcatggccgatctt
cagatacctgtgtccaaggaggtggaggatgaggtgaactcgtacttccaacgcatttac
aaccaccagccgaatcccacgctctccatcgacgaggtcctggacattctgcagcggttc
aaggagtcgagcaaccgccgtgaacaggaggtattcctgtgcatgctgcgtaatctgttc
gaggagtaccgcttcttctgtcagtatcctgagaaggagctgcagataacggcacagctc
tttggcggcatcatcgaccggaatctggtgcccactttcgtagcccttggcctgtccctg
cgctgtgttttggatgcacttcggaaaccggagggcaataagctcttctactttggcatc
acggcgctggaccgtttcaggactcgactccatacctacaacaagtactgtgagcatatc
cgttcgattccccacttctcggacttcccgccacatctcatccagtatgtggagtacgga
atgcacggtcaggagccgccggcgcagaagctgattggactgagcaacacgatcccatcc
gcaatttcatcaggaccgcccacggaggcacttttccgagctaattcaatggcaggtaac
gtgcctggtggcactctcggatcgggctccaaatcagccgttgctgtgtcgcatgccacg
cggatgaagtctatcgccaatgccaccaacatcgacactctgctagtggccaaccaggag
gagaaggtcacagtgccgccagagccagttcaggacaaaacagccttcatcttcaacaat
ctgagccagctgaacatcccgcagaagtgcgaggagatcaaggagataatgaccaaggag
tactggccatggctggcccagtacttggtcctcaagcgtgcctccatggagtttaacttc
cacaccctgtactacaatttcctggacgctctcaagaacggcgagatcaaccgattcgtg
accaaagagacgctgcgcaacatcaaggtccttctgcgctccgacaagggagtcatcaac
ttctccgatcgcagtctgctgaagaatctgggccactggctgggcatgatgaccctggga
cggaatcgcccaatcctccagctggatctcgatctaaagtcccttttggcggaggcctat
cataaaggacagcaggagctgttgttcgtggtaccgttcgtggcgaagatcctcgagtcg
tccgccaagtcgcgcattttccgctcgcccaatccctggaccatgggtatcatgtacgta
ttgggcgaactccaccaggagccggagctcaagctgaatctgaagttcgagatcgaggta
ctgtgcaagacgctcaacctggagctggccaagctgcggccggttatctacctgaaggat
ccaacgcgcgccctgctcatcgatcagcaaatgtcgcagccaaaacccaagcagccggag
cccattgcagctgctccggctctgccgagtcaacagccatcgccggcacaagcgccacag
caaccgccaccgccgcagcagcagcaggctcctccgccgccaccgccggccgaggtggac
ccgcaggcagcagccgccgccatgatggtgggaagtggaggcagtggagcaaacagcacg
cctggatcggtggcttcgccaaatttgccaacagatcccagccaagtggttctcccgccg
cccgagccgcgctactcctacgtggacgtcaatgtgagcaacttccagctgattgcccag
cacctgattctgccacccaacatcccgttcctgcacgccaatccgggaatcaaacacatt
gtgatcaatgccgtggagcgcaccatcaccgactggctgcagcccgttgtggatcggagt
attcggatcgcctgcgccaccaccgagcagatcatccgcaaggactttgccctggacgcg
gatgagaacagaatgcgcacggccgcccaccagatggtccgtaacctggccgccggcatg
gccatgatcacgggaaaggatgagatcgcgcgggccatcagccagaacctgcacaaggca
ttcgtgtcgtcgctgtccggcatgcccagcctgaccgaaatccaggccgctgccatgcag
ctggccaacgagaatgtggagctggtgtgtgccttcattcagaagacttccgccgagaag
gctgccgccgagatcgatcggcgattgagcactgactttgagaccaggaagattgctcgc
gaggagggtaaccggtttgtggatgcccagatcctcagctaccagcaggagcgactcccg
gaggcggtgcgcatcaaggtgggccctgccccagcgactttgtacgccgtttactcggaa
tttgccaggagcattcccggtttccagcagatgagcgatcgggacattgctctcttcgta
ccgaagccccaggatctgccgccaccgaatgtgtttgccaatgacgagagcagcatggtg
tatgccgaggtggccagcaagatggaggccttcatgaacacggccatcggtgtgccgtcc
ctgcaggtgcaggccagcaagatgcacatgctcctcaacgctctgatgtccacccgtcgg
cagcgcgaccaagagtcggccttcaatctcctgactcgtgcagtggagggtctaaccgag
ggtctggtcaacgtgccggagcacatcgaacagatgaaactctatcagaatattcacctg
cgcatcctcagtctcctgcagaacagcttcggtgctccgaatacggagcgggctgtcacc
aagtgcttcttcgacatccgtgaggaggttcgctacaacgtggaggcggcacgatccctg
atcacatcgcacttcgtcaatctgaaccagttcgatggcatgctgcgcgactgcatggac
aatggcaacaactacgtggccatctcgttcggcatcgccctgctggagcgcctcatcatg
gaggaccgagccattaacatcgttcaggacaacgagttcatggccaccgtggaactgctg
ggtcgactcacccagcacaggcatcgctatccggaatgcattgtcaacgccatcgagacg
ttgtggagcggtaacttcaactcgagcagtgacttcagtccgtttaacgccagtgagcgc
tacttggcgggagcctcgcactacatccactccggcatgcatcattcatgcgacacggac
gacccgccgggactgcaagagaagacagagttcctgctcaaggactgggtggcgctgtat
acccagcagaaccagcaatccacccgtgatgcccgcaactttggcgcctttgtccaaaag
atgaacacctacggcatcctgaaaacggacgatctgatcacgcgcttcttccgccaagcc
acgcacatctgcacggatgttgtctatcggatgttcgcggagcccaatctccaacttaac
caggccaagaacaagatattccaatggatcgatgcgttcgtccacctcatcgccatgctt
gtccggcattcgggcgaggcgggtaatccgaccaccaagatcaacctgctgaacaaagtg
ctgggcatcgtactgggcacactgctgaaggatcaagagatgcgcggcaccagcttccag
caggtgggctaccaccggttcttcatgatgctcttcatggaactctgctctgcggacatg
atcctcgagtcgctgatgcacagcattgtgtcggccttcgcctacacctatcatctctta
aatccgagcgtggcgcccggcttctgttttgcgtggctggagcttatctcccatcgggtg
tttttgggacgcatactagttcagattcccggccagaagggatggccactctacgcccag
ttgctgcaggatctcttcaaatatctggcaccattcctgcgcaacacagagctcggaaaa
ccggttcaactcctgtacaagggaacactgcgtgtactgctagtgctgctgcatgatttc
cccgagttcctgtgcgattatcattttggattctgtgacaccataccgccaaactgtgtc
caaatgcgtaacattatactgtcggcgtttccgcgtaacatgcgactgccggatccgttt
acgcccaacctaaaggtggacatgctatcggacagcagcaacgcacccaaggtgtctagc
agctatatcatgaacatacagccgccgaactttaagaaggatctcgactcttacctgaag
gctcgggcaccggtaaccttcctttcggaattgcgcggacacttgcaggtgaccagcgag
ccaggtacacgctacaacatgacgctcatgaatgccctcgttatgtatgtgggtacacaa
gcaattgcgttaatcagaaacaaaaactttgtgcccaacacctcaaacattgcacacagc
gctcacatggacattttccagaacttggccgtagacttggatactgaaggtcgctatctc
ttcctgaatgcaattgccaatcagttgcgctatcccaacagccatacgcactattttagc
tgtgcggtattgcatctgttcgccgaggccaactcggaggcgattcaggagcagattacg
cgtgtcctgctcgaacgtttgatcgtgaaccggccccatccgtggggtctgctcatcacg
ttcatcgagctgattaagaatcccatttacaagttctgggaccatgattttgtgcactgc
gcgccagagataaccaagcttttcgagtcggttgcccgatcctgtctggccaaatcgaat
cccccgcagcaactgaacatggcgcccgttgtcgatggcgagggccaggaggtagccaac
atcaactga
DBGET
integrated database retrieval system
