Drosophila ananassae: 6496542
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Entry
6496542 CDS
T01059
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dan
Drosophila ananassae
Pathway
dan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6496542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dan03019
]
6496542
03041 Spliceosome [BR:
dan03041
]
6496542
Messenger RNA biogenesis [BR:
dan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
6496542
Spliceosome [BR:
dan03041
]
Complex B
Other components
Prp19-related factors
6496542
Complex C
6496542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
Suf
TPR_2
Mad3_BUB1_I
TPR_15
TPR_8
TPR_12
PPR
ARM_TT21_C
RPN7
ARM_TT21
DHR-2_Lobe_A
TPR_10
Motif
Other DBs
NCBI-GeneID:
6496542
NCBI-ProteinID:
XP_001961110
UniProt:
B3MHD2
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MAAVTSQALNLEIKFDEEDVPYEEEILRNAYSVKHWLRYIDHKAKAPNNGVNQVYERALK
ELPGSYKIWHNYLRTRRKQVRGKIPTDPMYEEVNSAFERSLVFMHKMPRIWMDYGAFMTS
QCRITRTRHVFDRALRALPVTQHARIWPLYLQFVRRFDMTETALRVYRRYLKLCPEDAEE
YVDYLQEAGHLDEAAQQLANIVDNESFASKHGKSNHQLWNELCDLISKNPHKVHSLNVDA
IIRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQF
EELSLNKRMEQVAQNETATEEDDIDVELRLSRFEYLMERRLLLLNSVLLRQNPHNVHEWH
KRVTLYEDKPAEIISTYTEAVQTVQPKQAVGKLHTLWVEFAKFYEANGQVEDARVVFERG
TEVEYVKVEDLAAVWCEWAEMELRQQQFEAALKLMQRATAMPKRKIAYHDDTETVQARLH
RSLKVWSMYADLEESFGTFKTCKAVYERIIDLKICTPQIIINYGMFLEEHNYFEEAYRAY
EKGIALFKWPNVYDIWNSYLTKFLERYGGTKLERARDLFEQCLDQCPPEHAKYFYLLYAK
LEEQHGLARHAMSVYDRATAAVKEDEMFDMYNIFVKKAAEIYGLPRTREIYEKAIEALPE
QHMRHMCVKFAELETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKEFEVRHGNEDTMR
EMLRIKRSVQATYNTQVNMMAAQFLNNGAADAGAGNGAEPDAMRLLDEKTRQAAAEAKQK
PAEKAASNIMFVRGETQGGAKNKENTVVNPDEIDIGDSDEDEEEEEEDDDAAEGGNENDT
EAATKTDSEGLVMKKLRFEQKAIPAKVFGSLKHSNQKDSDEE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtaacgagtcaagcactcaatcttgaaatcaaattcgacgaggaagatgtg
ccgtacgaggaggaaatcctcaggaacgcttactccgtaaaacactggctgcgctacatc
gatcacaaggccaaggctccgaataatggtgtgaaccaggtctatgagagggcgctgaag
gaactgcccggcagctacaaaatctggcacaactatttgcgcacgaggagaaagcaggtg
cggggcaagattcccacggatcccatgtacgaggaggtcaacagcgccttcgaacggtct
ctggtttttatgcacaaaatgccccgtatttggatggactacggtgcctttatgacgtct
cagtgccgcattacgcgcactcgccacgtatttgaccgcgccctgagagctcttcccgtc
acacagcacgccagaatctggcccctgtatctgcaattcgtccggcgcttcgacatgacg
gaaacagcgctgcgggtttaccggcgctacctaaaactctgtcccgaggacgccgaggag
tacgtggactacctgcaggaggcgggacacctggacgaagccgcccagcagctggccaac
attgtggacaacgagagcttcgcctccaagcacggcaagtccaaccaccagctgtggaac
gagctgtgcgacctcatctcgaagaatccgcacaaagtgcactccctgaacgtggacgcc
atcatccgtggcggtttgcggcgatacacggaccagctgggccacctgtggaactccttg
gcggactactacgtgcgctcgggtctgttcgatagagcgcgcgacatctacgaggaagcc
atccaaacggttaccactgtcagagacttcacccaggtcttcgatgagtacgcccagttc
gaggagttgtccctgaacaagcgcatggagcaggtcgcccagaacgaaacagccaccgag
gaggatgacatcgatgtggagctgcggctgtcgcggttcgagtacctcatggagcgacgg
ctgctgctgcttaatagtgtcttgctgcgacagaacccccacaatgtccacgagtggcac
aagcgagtgactctctacgaggacaagccagccgaaatcatttccacgtacacggaggcc
gtgcagacggtgcagcccaagcaggcggtgggcaagctgcacaccctctgggtggagttc
gccaagttctacgaggccaacggccaggtggaggatgcccgcgttgtcttcgagcgcggc
accgaagtggagtacgtcaaggtggaggatctggccgccgtgtggtgcgagtgggctgag
atggagctgcgacagcagcagttcgaggctgccctgaaactgatgcagcgggccacggcg
atgcccaagcgaaagatagcctatcacgatgatacggaaactgtgcaggcgcgactccat
cgctcgctgaaagtgtggtccatgtacgccgacttggaggagtccttcggcacgttcaag
acctgcaaggccgtctacgagcggatcatcgacctgaagatctgtacgccgcaaatcatc
atcaactacgggatgttcctggaggagcacaactacttcgaagaagcctatcgcgcgtac
gagaagggaatcgctctgttcaagtggcccaacgtgtatgacatatggaactcttaccta
accaagttcctggagcggtacgggggcactaagctggagcgggcgagggatctcttcgag
cagtgcctggaccagtgtccgccggagcatgccaagtacttttatctgctgtacgccaag
ctggaggagcagcatggcctggccaggcacgccatgtcggtctacgatcgggccactgcc
gccgtgaaggaggacgagatgttcgacatgtacaacatctttgtgaagaaggcggcagag
atctatggcctgccgcgcacccgggagatctacgagaaggctatcgaagcgctgccggag
cagcacatgcggcacatgtgcgtcaagtttgcggagctggagacgaagctgggtgaggtg
gatcgagcccgagccatctacgcccattgttcccaggtttgtgatccacgcataactgca
gacttctggcagacctggaaggagttcgaggtgcgacatggcaacgaggacacgatgcgg
gagatgttgcgcatcaagcgctccgtgcaggccacctacaacacccaggtcaacatgatg
gcggcccagttcctgaacaacggagcggccgatgccggagctggaaacggagccgagccg
gatgccatgcggctgctggatgagaagacgcgccaggcggccgccgaggccaaacagaag
cctgccgagaaggcagcctccaatattatgtttgtgcgcggcgaaacccagggcggtgcc
aagaacaaggagaacacggtggtgaatcccgacgagatcgacatcggcgacagcgacgag
gacgaggaggaagaggaggaggatgacgacgcggcggagggaggaaacgagaacgacacc
gaggcggccaccaaaaccgatagcgagggcctggtgatgaagaaactgcgcttcgagcag
aaggccattccggccaaggtcttcggcagcctgaagcactccaatcaaaaggactctgac
gaggagtaa
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integrated database retrieval system
