Drosophila ananassae: 6496870
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Entry
6496870 CDS
T01059
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
dan
Drosophila ananassae
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dan03016
]
6496870
Enzymes [BR:
dan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
6496870
Transfer RNA biogenesis [BR:
dan03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
6496870
Prokaryotic type
tRNA splicing ligases
6496870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF6471
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
6496870
NCBI-ProteinID:
XP_001963238
UniProt:
B3MK04
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MVVRPYNDELKYLEKISDHCWRIKKGFQPNMNVEGCFYVNSRLERLMLEELKNSCRPGAV
GGFLPGVKQIANVAALPGIVGRSIGLPDIHSGYGFAIGNMAAFDMDDPLSVVSPGGVGFD
INCGVRLLRTNLYERDVQPVKEQLAQSLFDHIPVGVGSKGIIPMNARDLEEALEMGMDWS
LREGYVWAEDKEHCEEYGRMLNADPAKVSMRAKKRGLPQLGTLGAGNHYAEIQVVDEIYD
KWSASKMGIEEKGQVVVMIHSGSRGFGHQVATDALVQMEKAMKRDKIETNDRQLACARIN
SVEGQDYLKAMAAAANFAWVNRSSMTFLTRQAFAKMFNTTPDDLDMHVIYDVSHNIAKVE
NHIVDGKERKLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGTMGTCSYVLTGTEQGM
QETFGSTCHGAGRALSRAKSRRNIDYKEVLEKLDQIGIAIRVASPKLVMEEAPESYKDVT
DVVDTCHAAGISKKCIKMRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgcgtccttacaacgatgagctcaagtacctggagaagatcagcgaccactgc
tggcgcatcaagaagggcttccagccgaacatgaatgtcgagggatgcttctacgtcaac
agccggctggagcgcctgatgctggaggagctgaagaactcgtgtcgcccgggagcagtc
ggtggcttcctgcccggcgtaaaacaaatagccaatgtggcagccctgcccggcatcgta
ggacggtctataggcctgccagacatccattctggctacggattcgccatcggaaacatg
gctgcctttgacatggacgatcccctgtccgtggtgagtcccggtggcgtaggattcgac
atcaactgcggtgtccgtctgctgcgtaccaacctatatgagcgggacgtgcagccggtg
aaggagcaactagctcagtctctgtttgatcacattcctgtgggtgtcggctcgaagggc
atcatcccgatgaatgctcgtgacctggaagaggccctcgaaatgggcatggactggtcg
ctacgcgagggttacgtctgggccgaggacaaggagcactgtgaagagtatggacgcatg
ctgaacgccgatcccgccaaggttagcatgcgggccaagaagaggggacttccgcagctg
ggaacattgggtgcgggtaatcactacgccgagatccaagtggtggacgagatctacgac
aagtggagcgcctccaaaatgggcattgaggaaaagggtcaggtggtggtgatgattcac
tcgggcagccgtggctttggccatcaggtggccaccgatgctctagtgcaaatggagaag
gccatgaagcgagacaagattgagacgaatgaccggcagctggcctgcgcgaggatcaac
tcagtggagggtcaggactacctcaaggccatggcggcggccgccaacttcgcttgggtc
aaccgcagctccatgaccttcctcacgcgccaggcctttgcgaaaatgttcaacaccacc
ccggatgatctcgacatgcacgtcatctacgacgtttcgcacaacattgccaaggtggag
aaccatattgtcgatggaaaggagcgcaagttgctggtgcaccggaaaggctcgactcgc
gcctttccaccacatcaccctctcatcccagtggactaccagctcacgggacagccagtt
ctagtgggcggaaccatgggcacctgcagctatgtcctcactggtacagagcaaggcatg
caggaaactttcggcagcacctgccatggagcgggacgtgctctctcccgtgccaaatct
cgccggaatatcgactacaaggaggtgctcgaaaaactggatcagatcggtattgccatt
cgcgtggcctcgcccaagttagtcatggaggaggccccagagtcgtacaaggacgtgacc
gatgttgtggatacctgtcatgcggcgggtattagcaaaaagtgcattaaaatgcgaccc
attgcggttatcaagggctga
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