Drosophila ananassae: 6498120
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Entry
6498120 CDS
T01059
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
dan
Drosophila ananassae
Pathway
dan03013
Nucleocytoplasmic transport
dan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6498120
09122 Translation
03013 Nucleocytoplasmic transport
6498120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dan03019
]
6498120
03041 Spliceosome [BR:
dan03041
]
6498120
Messenger RNA biogenesis [BR:
dan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
6498120
Spliceosome [BR:
dan03041
]
Complex C
Other components
EJC/TREX
6498120
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
6498120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Chs7
FimA
Motif
Other DBs
NCBI-GeneID:
6498120
NCBI-ProteinID:
XP_001962116
UniProt:
B3MJC7
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MRRLKKLKSVTGTQDGGGGGDGAEVRNTAGEKDANGGSGGAGSVGQEPGALNPEIFKHFD
KNGRNEFLKYLKSQLQDTAESPVYDSNGVFKQGVSHAIYELLWQALRFTHKKDLVLHLLT
EVVSLHEQLPSLIVDVVNILDSETSLMTEGLHEERHAFVLLVKDMDKVVPESLLKERLEI
DTLQEVGIVKNKSFYSKFIKVKTKLYYKQRRFNLFREESEGFAKLITELNQDFEDNTTPE
SIMDIIKSLIGCFNLDPNRVLDIIIESFETRPDRWQLFIPLLRSYMPTGAIICEVLGYKF
CHFKDSKTPRSLYHVCALLLKHGVIELNDVYVWLTPNDGSIKADWDEELADARELVRKLN
LISTNKKEDEKDPPPPPSVKKFDEEKYNVNQKFGLCEALLKVGDWENAYKIIQKLPEQAV
VLQEPIARGIADLIHLSVEHVYYKKVFKAPAGRKQSRSRLYDDSKLVAKMQAKDFSDLRK
YTWPMANVLGPAMHYDTVLMYKLIRIMSKLVIDMGVDSLNGPPPNTEAEQHYYDIMTSLD
ACILPSLLYLDNNCSMSEEIWAVLKYFPYHFRYSLYARWKNDSYQLHPNLIRRCGLAQRD
IKALMKRVSKENVKQLGRLVGKYSHCAPGLLFDYILLQIQIYDNLIGPVCDMLKYLTALS
FDCLGYCIIESLTLTGRLRFKDDGTSLSLWLQSLASFCGTIYKKYSIELSGLLQYVANQL
KSQKSLDLLILREIVHKMAGVESCEEMTNDQLQAMCGGEQLRGEAGYFSQVRNTKKSSNR
LKEALANNDLAVAICLLMAQQKHCVIYRETAAHSHLKLVGNLYDQCQDTLVQFGTFLGST
YSVDEYVERLPSIITMLREYHINTDVAFFLARPMFTHQINQKYDQLRKADPNAKKLTTVQ
KLQKYLEATQLIMNPIVESVRPLHSAKVWEDISPQFLVTFWSLSMYDLHVPTDSYQREIG
KLKQLAQQAAEGKDSNQSKNKKEQERYIALMEKLNDERKKQHEHVDKISQRLQEQKDSWF
LLRSAKSAKNDTITQFLQLCLFPRCTFTALDALYCAKFVHTIHNLKTSNFSTLLCYDRIF
CDITYSVTSCTEGEATRYGRFLCAMLETVMRWHADQAVFNKECANYPGFVTKFRVSNTFS
EANDHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQIRNALIILMRILPHYPVLGKLAQ
IIERKVDKVREEEKTKRPDLYVIASSYIGQLKLRSPHMLKESDFHQLADRANKESPPTGG
ASGGTPIKVLSTEKTSPISGSVQSAAAKQPGAATGFYANEAKPGNKDQDAKTVSLTRSDS
KNQKSDAISSNLVSISTSSTTDRESKQRELPAPRDSQSRNKDDQLEQTNGSSQRESRSRD
VDREKQDQHEQRHSSIASHRSSRDTVRAKPTEAEQHQRSRERSQRLEELEATQQRGLKRE
KSSRRGGGGEERHRHNEGVDVVVDLVGGNDHRHYEEYESRGVRDRDLSSVSNESNGSMQH
RQRSHETIEYEKADSKRRKLESSSSSSKKVEELVDSVKKARGLKTKDRNKDKLSEEERDA
RKDRKLGRKRDRAEDSNSGDHKRRREAQNGEEEGRDRERHRDKSPRERSHEKFDRERGGS
SRGEDRQYTISKSTRSSRVNY
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgcggagactgaagaaactcaagagcgttaccgggacgcaggatggcggcggtggcggc
gatggagctgaagtccggaacacagctggagaaaaggacgcgaacggcggcagcggtggc
gccggtagtgtgggccaagagccgggcgccctcaatccggaaatcttcaagcatttcgac
aagaacggacgtaacgaattcctgaagtacctgaaaagtcaactgcaggacacagcggag
agtcccgtctacgacagcaatggtgttttcaagcagggcgtctcgcacgccatctacgag
ctgctctggcaggcgctgcgcttcacccacaaaaaggatctcgtcctgcacctactgacg
gaggtggtgtccctccacgagcaacttcccagcttgattgtggatgtggtgaatattctg
gacagcgaaacgtccttgatgactgaagggctgcacgaggagcgtcatgccttcgtgctg
ttggtcaaggacatggacaaggtggtgccggaaagtctcctgaaggagcgcttggaaatc
gacacgctccaggaagtgggcattgtcaagaacaagagcttctactcgaagttcatcaaa
gtcaaaacaaagttgtattacaagcagcgccgttttaatcttttccgcgaggagagtgaa
ggctttgcgaagctcattaccgagctgaatcaggactttgaagataataccactcccgaa
agcataatggatattatcaaatcgctcataggctgctttaatctggatcctaatcgtgtc
ctagacatcatcatagaatcgttcgagactcggcctgatcgctggcaattattcattccc
ctgctgcgcagctatatgcccaccggtgccataatttgcgaggttcttggctacaagttc
tgccatttcaaggattccaagacgccccgctctctctaccatgtctgtgccctgctgctg
aagcacggagtgattgaacttaacgatgtctatgtgtggttgactccgaatgatggtagc
attaaggcggattgggatgaggagctggccgatgccagggaattggtgcgaaagctaaat
ctgatatccaccaacaaaaaggaggacgaaaaggatccaccaccgccgccctcggtgaag
aaattcgatgaggaaaaatacaacgtgaatcaaaagtttggtctctgcgaggcgctgctt
aaagtgggcgactgggaaaatgcctacaaaatcatccaaaagcttccagagcaggcagtt
gtcctgcaggagccaatcgctcggggaatcgccgacttgattcatctgtcggtggagcac
gtctactataagaaggtcttcaaggcaccggctggtcgtaagcagagccgcagtcgcttg
tacgacgattccaagctagtggccaagatgcaggctaaggatttctccgatttgagaaag
tatacgtggccaatggccaatgtccttggcccagccatgcactacgataccgtgctcatg
tacaaactgatccgcatcatgagcaagctggtgattgacatgggcgtggacagtttaaat
ggcccgccacccaacacagaggcggaacagcactactatgacattatgacctcgttggat
gcgtgtattctgccctccctgctctatctggacaacaactgttccatgtccgaggagatc
tgggcggtgttgaagtacttcccgtatcatttccgctacagtttgtatgcgcggtggaag
aacgacagctatcagctgcatccgaatctgattcggcgctgtggactggcccagcgggac
atcaaagcgctgatgaagcgtgtcagcaaggagaatgtcaagcaattgggtcgtctagtg
ggcaagtacagtcattgtgcccctggactactctttgactatatccttttgcaaatccaa
atctatgacaatctcattgggcctgtgtgcgacatgctcaagtacttgactgccctctca
ttcgactgcctaggctactgcatcatcgagtcgctgaccttaacggggcgcctgcgtttc
aaggacgatggcacctccctgtccttgtggctgcagagcttggcctcattttgcggcact
atatataaaaagtatagcatcgaactgagtggccttctgcagtatgtggccaatcagctt
aaatcgcaaaagagcttggatctgctgatcctgcgggagattgtacataagatggcgggt
gtggaatcatgcgaggagatgaccaacgaccagctgcaggccatgtgcggcggtgaacag
ctcaggggagaggccggctacttcagtcaagtgaggaatacgaaaaagtcctcgaatcgt
ttgaaggaggccctggccaacaatgatctcgccgttgccatttgtctgctgatggctcag
cagaagcattgcgttatctaccgtgaaacggcggcgcacagccacttgaagttggtgggc
aacctgtacgatcagtgccaggacacattagttcagtttggcacttttctggggtccacc
tactcggtggatgagtatgtggagcgcctgccctcgatcataaccatgttgcgagagtat
cacatcaacactgatgtggccttcttcctggctagacccatgtttacgcatcagataaat
caaaagtacgatcagctacgtaaggcggatcccaatgcgaaaaagctaaccaccgtccag
aaactgcaaaagtatctggaggccacgcagctgatcatgaatcccattgtggagtcagtt
cggccgctgcacagcgccaaagtgtgggaggacattagtccgcagttcttagtcaccttc
tggagcctgagcatgtacgacttgcatgtgccgaccgatagctaccagcgcgagatcggt
aagctgaagcaactggcccaacaggccgccgagggcaaggactccaatcagtcgaaaaac
aaaaaggagcaggaacgctacattgccctgatggagaaactgaacgatgagcggaaaaaa
cagcacgagcatgtggacaagatctcgcagcgactgcaggagcagaaggatagctggttc
ctcctccgttctgccaaatccgccaagaatgacaccatcacccagttcctgcaactgtgc
ctcttcccgcgctgcaccttcactgccttggatgcactctactgcgccaaattcgtgcac
accattcacaacctcaagacatcgaacttctccaccctgctttgctacgatcggatcttc
tgtgacatcacgtactcggtaacatcctgcaccgagggcgaggcgacgcgttacggacga
ttcctgtgtgccatgctggagaccgtgatgcgatggcatgcggatcaggccgtttttaat
aaggaatgcgccaactatcccggtttcgtaaccaaattccgggttagcaacacattctcg
gaggctaacgatcatgttggatacgagaattatcgccatgtgtgccacaagtggcactac
aagatcaccaaggcgatagtattctgtctggattccaaggacttcatgcagatacgtaat
gccctaatcatcctaatgcgcatcctgccgcactatccggttcttggcaaactggcccag
atcatcgaacggaaggtggacaaggtgcgtgaggaggagaagacaaaacggccggatttg
tatgtcattgcctcgagctacattggccagctgaagctgaggagtccgcacatgctcaag
gagagcgatttccatcagttggccgaccgagctaacaaggaatcacctccgacgggtggt
gctagtggcggtacaccgatcaaggtgctttccaccgaaaaaacgtcacccatctcggga
tctgtacaaagtgcggcagcaaaacagccgggtgccgcaactggtttctacgccaatgaa
gccaaaccgggcaacaaagaccaggatgccaagacggtctctcttacgcgcagcgattcg
aagaaccaaaagagtgacgccatctcgtccaatctggtgtccatatcgacttcatccacc
acggatcgagagagcaaacaacgtgagctgccggcgccgcgggattcgcagtctcgcaac
aaggacgaccagctggagcagacaaatggaagcagccagagggagagtcgcagccgggat
gtggaccgcgagaagcaggatcagcacgagcagcgccacagcagcattgccagtcatcgc
agctcccgggacacggtgagggcgaagccaacggaggccgagcagcatcaacggtcgcgt
gagcgctcccagcgtttagaggaattggaggccacccaacagcgtggcctgaagcgtgag
aagagttctcgacgtggcggcggtggggaagagcgtcaccggcacaacgaaggcgttgat
gttgttgtggatctggtgggcggcaatgatcatcgccactacgaggagtacgagagtcgc
ggtgttcgggatagagatcttagttccgtatccaatgagagcaatggttccatgcaacat
cgccagcgcagtcacgagaccatcgagtacgaaaaagcagattccaagcgtcgcaagttg
gagtcatcgtccagcagttcaaagaaggtggaggaactggtggacagcgtgaagaaggcg
cgcggcctgaagaccaaagaccgcaacaaggacaagctgtcggaggaggagcgtgatgcc
cgcaaggatcgcaagctgggtcgtaagcgggatcgagctgaggactccaatagcggtgat
cacaagcgtcgtcgtgaagcacaaaatggcgaggaagaaggccgtgatagggagcgtcac
agggataagtcaccccgagagcgttcccacgagaagttcgaccgggagagaggtggaagt
tcacgtggcgaggatcgccagtacaccattagcaagtcaacccgctcctcgagggtcaat
tactga
DBGET
integrated database retrieval system
