Drosophila ananassae: 6498242
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Entry
6498242 CDS
T01059
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
dan
Drosophila ananassae
Pathway
dan03008
Ribosome biogenesis in eukaryotes
dan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
6498242
09123 Folding, sorting and degradation
03018 RNA degradation
6498242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dan03021
]
6498242
03019 Messenger RNA biogenesis [BR:
dan03019
]
6498242
03009 Ribosome biogenesis [BR:
dan03009
]
6498242
03016 Transfer RNA biogenesis [BR:
dan03016
]
6498242
Transcription machinery [BR:
dan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
6498242
Messenger RNA biogenesis [BR:
dan03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
6498242
Ribosome biogenesis [BR:
dan03009
]
Eukaryotic type
Pre-60S particles
RNases
6498242
Transfer RNA biogenesis [BR:
dan03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
6498242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
6498242
NCBI-ProteinID:
XP_001962372
UniProt:
B3MKR2
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIIECNENKQVDPDTGRNIYEDATLPNPNGVEFDNLYLDMNGII
HPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKETTEKRLEIARLREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYV
HDRLNNNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM
LGLATHEPNFTIIREEFLPNKPRPCDICNQFGHEMEKCNGLGATTGANFKPDVPIGAEVK
FIFVRLSVLREYLKQTLVMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV
DRLVELYKKCVYKTRGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKNRQRREQQFKARDKA
RRRQERNQDHRSLDQSVFGANAVGAGNQPGNIGNYKEAAAALRLGKRSGAQAGLEDDEEE
EEEDNDEVRLWEDGFKDRYYESKFDVAPGNLQFRYAVALQYVRGLCWVLKYYYQGCASWN
WYFPYHYAPFASDFVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPEPWADLMSNP
DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTSEEVKRNKRGD
NYLYITNSSPHFKKVKRITEKSDDDECNAISFSGMRGTLAKSELNTAISGCLRSPISGLP
DITDNQIITTLFKDPEYDEDFIFEAKRLPEAVDPPKVLPPDEGKKHGPVIGFNSHLIRAY
IPDSGHRMLNAGMRNQGGGGGYGHGQGGGGGGGGYGQGGGGGGNQGQGYQNNSRNYNYNY
NNSYNNQQGGSQQNYQGNYQNRQQYGQNQRYQQDNNQHQQRNYNNYNNGRTNNYQQQQGG
NRQQYQNYRRF
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcattctttcggtggcttagccggaagtatccgagcgtgatcatcgag
tgcaatgagaacaagcaggtggaccctgacaccggccggaatatttacgaggacgccacc
ctcccgaatcccaatggggtggagtttgacaacctctacctggatatgaacggtattata
cacccgtgtacccatccagaggacaagccggcccccaaaaacgaggacgagatgatggta
gctatctttgattgcatcgaccgtctcttcggcattgtccgtcccaggaagctgctctac
atggccatcgatggagtggcgcctcgggccaagatgaaccagcagcgttcgcgtcgattc
cgagctgccaaggagaccactgagaagaggttggagattgctcgattgcgggaggagcta
atgagccgcggctgcaagttgccgcccgagaaggagaagggcgagcacttcgactccaac
tgcatcacgcccggcactccgttcatggaccggctcagcaagtgccttcactactatgtc
cacgaccggttgaacaacaacccggcctggaagggtgtcaaggtgatactttcggatgcg
aatgtgcccggcgagggtgagcacaagatcatggactacataaggaagcagcgggctcag
ccggaccacgatcccaacacgcaacatgtgctgtgcggcgccgatgcggatctcatcatg
ttggggcttgctacccacgagcccaacttcaccattatccgggaggagttccttccgaac
aagccccggccctgtgacatctgcaaccagttcgggcacgagatggagaagtgcaacgga
ctgggagccacgacaggagccaactttaaaccggatgtccccattggtgccgaagtgaag
ttcatctttgtgcgactgagcgtactgagggagtacctgaagcagacgctggtgatgccg
aacctgccgttcgaatacagcttcgagcgagctctggacgattgggtattcatgtgcttc
tttgtgggtaacgactttttaccgcatctgcccagtctggaaatccgcgagggagctgtc
gaccgcttagtggagctatacaagaagtgcgtctacaagacaaggggttaccttaccgac
tctggcgacgtcaatctcgaccgggtccagctgataatgacggatttgggcaacgccgaa
gaccagattttcaagaaccgacaacggcgcgagcagcagttcaaagccagggacaaggca
cgtcgtcgtcaggagaggaaccaagaccaccggtccttggatcaatcggttttcggagcc
aacgccgtgggagccggaaaccagccaggaaacattggcaactacaaagaggcagctgct
gcccttcgactcggaaaacgatcgggtgcccaggcgggactggaggacgacgaggaggag
gaggaggaagacaacgatgaggtgcggctgtgggaggacggattcaaggatcgctactat
gagtccaagtttgatgtggcacccggaaatctgcagttccgctacgccgtagctctgcag
tacgtcagaggactgtgctgggtgctgaagtactactaccagggctgcgcttcctggaac
tggtacttcccataccactatgctccgtttgcatctgatttcgtgaatattcagggactg
tccacaattttcgaaaaaggcacaaagcctttcaatccgttagagcagctcatgggcgtc
tttccagctgccagtagctcccatgtacccgagccgtgggcagatctcatgtccaacccg
gactccccgattatcgacttttatccggaggattttaagatcgacttgaacggaaagaag
ttcgcctggcagggagtggccttgctgccgtttgtggacgagaagcggctcttcaaggcc
ctggttccatactacgatcaactgactagcgaggaggttaaacgcaacaagcggggcgac
aactacttgtacatcaccaactcgagtccgcacttcaagaaggtgaaacgtataaccgag
aaaagcgacgacgatgagtgcaatgccatatcctttagcgggatgcggggaacactggcc
aaatcggagctaaacactgccataagtgggtgccttaggtcaccgatttccggtcttccg
gacatcacagacaaccaaattataaccacacttttcaaggatccagagtacgatgaggac
ttcatatttgaggcgaagagactgccggaagcagtggatccaccaaaggtactgccacca
gatgagggcaagaagcatggcccggttatcggttttaatagccacctgattagggcttac
attccggacagtggacaccgcatgttgaatgccggaatgcgcaatcaaggcggcggggga
gggtacggccacggacagggaggcggcggcggcggtggcggctacggacagggcggtggt
ggtggtggaaaccaaggacaaggctatcagaacaatagccgcaactataattacaattac
aataatagttacaacaaccagcaaggcgggagccaacagaactatcagggtaactaccaa
aatcgccagcaatacggtcagaaccagagataccaacaggacaacaaccagcaccagcag
cgcaactacaacaactacaataatggcaggacaaacaactatcaacagcaacagggcggc
aatcgacaacaataccagaactacagaaggttttaa
DBGET
integrated database retrieval system
