Drosophila ananassae: 6499066
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Entry
6499066 CDS
T01059
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dan
Drosophila ananassae
Pathway
dan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6499066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dan03019
]
6499066
Messenger RNA biogenesis [BR:
dan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
6499066
U7-dependent histone pre-mRNA processing factors
6499066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
PglZ_C
Motif
Other DBs
NCBI-GeneID:
6499066
NCBI-ProteinID:
XP_001955372
UniProt:
B3LXN9
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDPNFIKELKRQVHTLDAVLL
SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD
TAFEKITQLKYNQTVSLKGKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK
ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA
GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN
NPFQFKHIQLCHSLADIYKLPAGPKVVLASTPDLESGFTRDLFVQWASNSNNSIILTTRT
SPGTLAMELVENCTPGRQIELDIRRRVELEGAELDEYLRTQGEKLNPLIVKPDVEEESSS
ESEDDIEMSVITGKHDIVVRPEGRHHSGFFKSNKRHHVMFPYHEEKVKYDEYGEIINLDD
YRIADTSGYDFVPMEEQNKENVKKEEPGSGIDHQTNGTIGDTDVQLLEKPTKLINQRKTI
EVNAQIQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVAKHCEQNVGARVFTP
QKGEIIDVTTEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRLKAIDAAMDVTAE
QDNSAQEAKTLTLETLAEDEIPVHNSVLINELKLSDFKQILMRNNINSEFSGGVLWCSNG
TLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaattataaagctacacaccatatcgggggctatggacgagtccccgccatgc
tacattctccagatcgacgacgtgaggattctgctcgactgcggatgggacgagaagttc
gatcccaactttattaaggagttgaaaagacaagtccatacgttagatgccgtgctgctc
tcccacccagacgcctatcacctgggtgctcttccctatctggtgggcaaattgggtctc
aattgccccatttacgccaccattcctgtgttcaagatgggtcaaatgttcatgtacgat
ctgtatatgtctcacttcaacatgggagactttgatctcttctcactggacgacgtggac
acagccttcgaaaagatcacccaactaaagtacaaccaaactgtttctctcaagggaaag
ggctacggcatatccataactcctctgaatgctggacacatgatcggcggcactatctgg
aagattgtcaaggttggtgaggaggacattgtgtatgccactgacttcaatcacaagaaa
gagcgccacctgagcggatgtgagctggaccgtctgcagagaccgtcgcttcttatcacg
gacgcatacaatgcgcagtaccagcaggcgaggcgaagggcccgcgatgagaagctgatg
accaacatccttcagacggtccgaaacaatggcaatgttctgattgctgtagacactgct
ggaagagttctggagttggcccacatgctggatcaattgtggaaaaacaaggagtcgggg
ctgatggcctactcgctggcgttactgaataatgttagttacaatgtgatcgagtttgcc
aaatcgcaaatcgagtggatgagcgacaagctgaccaaagctttcgaaggagcccgcaac
aatcccttccagttcaaacacatccagctttgccattccctggcggatatctacaagctg
ccagcgggcccaaaagttgtgttggccagtactccggacctggaaagtggattcaccaga
gacctcttcgttcagtgggccagcaactccaacaacagcattattctaaccactcgcacc
tctcctggaactttggcgatggaattggtggaaaactgcactccgggaagacaaattgag
ctggacatcaggcgaagggtggaactagagggcgccgagttggatgaatacctgcggact
caaggagaaaagcttaacccactgatagtaaagcccgacgtggaagaggaaagtagctcc
gaatccgaggatgacatagagatgagcgtgatcacaggaaagcatgacattgttgtccgc
ccggagggtcgtcaccattcgggtttcttcaagtccaataagcgccaccatgtgatgttc
ccttatcacgaggagaaagtcaagtacgatgagtacggagagatcattaacctggacgac
taccgcatcgcagataccagtggctacgatttcgtacccatggaagagcagaacaaggag
aacgtcaaaaaggaggagccggggtcgggtatagaccatcagacaaacggcaccataggc
gataccgatgtccagctactggaaaagcccactaaactgattaaccagcgaaagactata
gaggtgaacgcccaaattcaaagaatcgactttgaaggtcgctccgatggtgagtctatg
ttgaagattctatcgcaactgcgaccacgccgggtaattgtcatccacggaactgctgag
ggcacccaggtggtggccaagcattgtgagcagaacgttggagctcgtgtcttcacgccc
caaaaaggtgagatcatcgatgtgactacggagattcatatctaccaggtccgcctcacc
gagggactcgtctcgcagttgcagtttcagaagggcaaggacgcggaagtggcctgggtg
gacggtcgcttgggcatgcgtctgaaagcaatcgatgctgcaatggatgtgactgctgaa
caggacaatagtgcgcaagaggccaaaacattgacgctagagacgttggccgaggacgag
atccccgtccacaactctgtgctcataaacgagctgaaactctcagatttcaagcagatt
ctcatgcgaaacaacatcaactctgaattctctggaggtgtattgtggtgcagcaatggc
accctggctctgagacgtgttgatgccggcaaggtggccatggaaggctgcctttcggaa
gaatactataagatcagggagctgctttacgaacagtacgcgatagtttaa
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