Drosophila ananassae: 6503074
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Entry
6503074 CDS
T01059
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dan
Drosophila ananassae
Pathway
dan03020
RNA polymerase
dan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6503074
09124 Replication and repair
03420 Nucleotide excision repair
6503074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dan03021
]
6503074
03400 DNA repair and recombination proteins [BR:
dan03400
]
6503074
Enzymes [BR:
dan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6503074
Transcription machinery [BR:
dan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
6503074
DNA repair and recombination proteins [BR:
dan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
6503074
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
6503074
NCBI-ProteinID:
XP_001963379
UniProt:
B3MQ29
LinkDB
All DBs
Position
Unknown
AA seq
1889 aa
AA seq
DB search
MSTTTDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGVQFAETMEGGRPKLGGLMDPRQGV
IDRTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPHNP
KIKEIVMKSKGQPRKRLAYVYDLCKGKTICEGGEDMDLTKENQQPDPNKKPGHGGCGHYQ
PSIRRTGLDLTAEWKHPNEDSQEKKIVVSAERVWEILKHITDEECFILGMDPKYARPDWM
IVTVLPVPPLAVRPAVVMFGAAKNQDDLTHKLSDIIKANNELRKNEASGAAAHVIQENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFITREQMMNLLMFLPTWDGKMPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHICFLELGHDIAGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYNEIQCAIKKAKDDVINVIQKAHNMELEPT
PGNTLRQTFENKVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPYGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGELVEFQNMPT
VKLSNKSFEKRFKFDWSNERYMRKVFTDDVIKEMTDSSDAIQELEAEWDRLVTDRDSLRQ
IFPNGDSKVVLPCNLQRMIWNVQKIFHINKRLPTDLSPMRVIKGVKGLLERCVIVTGNDR
ISKQANENATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPKRTVISEDQEFVNVYYEMPDFDPTRIS
PWLLRIELDRKRMTDKKLTMEQIAEKINVGFGEDLNCIFNDDNADKLVLRIRIMNNEENK
FQDEDEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGEF
KAIGEWLLETDGTSMMKVLSERDVDPIRTSSNDICEIFQVLGIEAVRKSVEKEMNAVLQF
YGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAAAHAET
DPMRGVSENIIMGQLPKMGTGCFDLLLDAEKCRFGIEIPNTLGSSMLGGAAMFIGGGSTP
SMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSS
PGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYA
STTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNY
SPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASP
HYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY
SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSP
MYSPTAPSHYSPTSPAYSPSSPTFEESDD
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaccacggactcgaaggcgcccctgcgccaggtgaagcgcgtacagtttggc
attttgtcacctgatgaaatccgccgcatgtccgtcaccgagggcggcgtccagttcgcc
gagaccatggagggcggccggcccaagctgggcggcctcatggatccccgacagggcgtc
atcgatcgaacctcccgctgtcagacgtgcgccggcaacatgaccgaatgccccggccac
tttggacacatcgacctggccaagccggtctttcacattggcttcatcacaaagacaatc
aagatcctgcgctgcgtgtgcttctactgctccaagatgctcgtctcgccgcacaatccc
aagatcaaggagatcgtcatgaagtccaagggtcagccgcgcaagcgcctcgcctacgtc
tatgacctgtgcaagggcaagaccatttgcgagggcggcgaggacatggacctgaccaag
gagaaccagcaaccggatccgaacaagaagcccggtcacggtggctgcggtcactaccag
ccgtccattcggcgcactgggctcgatctcaccgccgagtggaagcatcctaacgaggat
tcgcaggagaagaagattgtggtgtcggcggagcgggtgtgggagatcctcaagcacatc
accgacgaggagtgcttcatactgggcatggacccgaagtacgcccgtcccgattggatg
attgtcacagtgctgcccgttccgccgctggcagtgcgtccggcggtcgtgatgttcggc
gccgccaagaaccaggacgatttgacgcacaagctctcggacatcatcaaggcgaacaac
gagctgcgcaagaacgaggccagcggtgcggcggcccacgtcatccaggagaacatcaag
atgctgcagttccacgtggccaccctggtggacaacgacatgcccggcatgccgcgggcc
atgcagaagtccggcaagccgctgaaggccatcaaggcccggttgaagggcaaggagggc
cgcatccgtggcaacttgatgggcaagcgtgtggacttctccgcccgtactgtcattact
ccggatcccaatctgcgcatcgaccaggtgggtgtgccgcgctccatcgcccagaatctg
accttccccgagctggtgacgcccttcaacatcgatcgcatgcaggagctggtgcggcgc
ggcaactcccagtacccgggcgccaagtacatcgtccgggacaacggcgagcgcatcgat
cttcgcttccatcccaagtcctcggacctgcatctgcagtgcggctacaaggtggagcgg
catctgcgcgacgacgacctggtcatcttcaaccggcagccgacgctgcacaagatgagt
atgatggggcacagggtgaaggtgctgccctggtccaccttccgcatgaacctgtcgtgc
acatcgccctacaacgccgatttcgacggcgacgagatgaacctgcacgtgccccagtcg
atggagacgcgcgccgaggtggagaacatccacatcacgccccggcagatcatcacgccg
caggccaacaagcccgtcatgggcattgtgcaggacaccctgaccgccgtccggaaaatg
accaagcgcgatgtcttcatcacgcgggagcagatgatgaacctgctcatgttcctgccc
acttgggacggcaagatgccccagccgtgcatcctcaagccgcgtcccctgtggaccggc
aagcagatattctccctgatcatccccggcaacgtgaacatgatccgcacccattcgaca
catcccgacgaggaggacgacggcccctacaagtggatctcgcccggcgacaccaaggta
atggtggagcacggcgaactgatcatgggcattctctgcaagaagacgctgggtacctcg
gccggctccctgctccatatctgtttcctggagctgggacacgacattgccgggcggttc
tacggcaacatccagacggtgatcaacaactggctgctgctggagggccacagcatcggt
atcggtgacaccattgccgatccgcagacctacaacgagatccagtgcgccatcaagaag
gccaaggacgacgtgataaacgtcatccagaaggcccacaacatggagctggagccgacg
cccggcaacaccctgcgtcagaccttcgagaacaaggtgaaccgcatcctgaacgatgct
cgtgacaagaccggcggctccgccaagaagtccctcaccgagtacaacaatctgaaggcc
atggtggtgtctggttcgaagggatccaacattaacatctcacaggttattgcttgtgtg
ggccagcagaacgtcgagggtaagcggattccgtatgggttccgcaagcgcaccctgccc
cacttcatcaaggacgattacggtcccgagtcgcgcggcttcgtggagaactcgtatctg
gccgggctgacgccctcggagttctacttccacgccatgggcggtcgcgagggtctcatc
gatacggccgtgaagaccgccgaaaccggttacatccagcgtcgtctgataaaggccatg
gagtcggtgatggtcaactacgacggcacagtccgtaactcggtcggccagctcatccag
ctgcgttacggcgaggacgggctctgcggcgagctggtcgagttccagaacatgccgacg
gtgaagctctcgaacaagtcgttcgagaagcgcttcaagttcgactggagcaacgagcgc
tacatgcgcaaggtgttcaccgacgacgtcatcaaggagatgaccgacagcagcgatgcc
atccaggagctggaagctgagtgggatcgcctggtcaccgatcgcgacagtttgcggcaa
atcttccccaacggtgactccaaggtggtactgccctgcaatctgcagaggatgatctgg
aacgtgcagaagatattccacatcaacaagcgcctgcccacggacctctcgccgatgcgc
gtcatcaagggcgtcaagggcttgctggagcggtgcgtgatcgtgaccggaaacgaccgg
atctcgaagcaggccaacgagaacgccactctgctgttccagtgcctcatccggtcgacg
ctctgcaccaagtacgtgtcggaggagttccggctgtcgacggaggccttcgaatggttg
atcggagaaatcgagacccgtttccagcaggcccaggccaatcccggcgagatggtgggc
gccctcgccgcccagagtttgggcgaaccggccacccagatgacactgaacaccttccat
ttcgctggtgtgtcgtcgaagaacgtgaccctgggtgtgccgcgtctcaaggagatcatc
aacatatccaagaagcccaaggctccctcactgacggtcttcctcacgggcggagcggcc
cgcgatgcggagaaggcgaagaatgtgctgtgccggctggagcataccacgctgcgcaag
gtgacggccaacacggccatctactacgatccggatccgaagcggacggtgatctcggag
gatcaggagttcgtgaacgtctactacgagatgcccgactttgatccgacgcgcatctcg
ccctggctgctccgcatcgagctggaccgcaagcgcatgacggacaagaagctgacgatg
gaacagatcgccgagaagatcaacgtcggcttcggcgaggatctcaactgcatcttcaac
gacgacaatgcggacaagctggtgctgcgcatccggatcatgaacaacgaggagaacaag
ttccaggacgaggacgaggccgtcgacaagatggaggacgacatgttcctgcgctgcatc
gaggcgaacatgctctcggacatgacgctgcagggcatcgaggccatcggcaaggtgtac
atgcatctgccccagacggacagcaagaagcgcatcgtgatcaccgagacgggcgagttc
aaggccatcggcgagtggctgctcgagacggacggcacatcgatgatgaaggtgctgtcg
gagcgggacgtcgatcccatacggacctcgtcgaacgacatctgcgagatattccaggtg
ctgggcatcgaggcggtgcgcaagtccgtcgagaaggagatgaacgccgtgctgcagttc
tacggcctgtacgtgaactaccgccacctggccctgctctgcgacgtgatgacggccaag
ggccatctgatggccatcactcggcacggcatcaacaggcaggacaccggcgcccttatg
cgttgctccttcgaggagactgtcgacgtgctgatggatgccgccgcccacgccgaaacc
gatccgatgcgtggcgtctccgagaacattatcatgggccagctgccgaagatgggcact
ggctgcttcgacctgctcctcgacgccgagaagtgccgcttcggcatcgagatccccaac
acgctgggcagtagcatgctgggcggcgccgccatgttcattggcggcggctccacgccg
agcatgacgcctccgatgacgccgtgggtgaactgcaacacgccgcgctacttctcgcct
ccgggccatgtgagcgctatgacacctggtggacccagtttctcgccctcggccgcctcg
gatgcctccggaatgtcgcccagctggtcgccggcccatccgggctcctcgcccagctcg
ccgggcccctcgatgtcgccgtacttcccggcctcgcccagcgtctcgccctcgtactcc
ccgaccagtccgaactacacggcctcctcgccgggcggagcatctccgaactactcgccc
tcgagccccaactactcgccgacatcgccgctgtacgccacgacgagtccgcgctacgcc
tccaccacgcccaacttcaatccgcagtcgactggctactcgccgtcgtcgtcgggctac
tcgcccacgtcgccggtctactcgcccacgtcgaactaccagtcgagtccctcgttcgcg
ggcagcggcagcaacatgtactcgccgggcaacgcctactcgcccagctcgtccaactac
tcgcccaactcgccttcctactcgccgacatcgccttcgtattcgccttcgagtccctcc
tactcgcccacatcgccctgctactcgccgacgtcgccctcgtactccccgaccagcccc
aactacacgcccgtcaccccatcctactccccgaccagccccaactactcggcctcgccc
cactactcgccggcctcaccggcctactcgcagaccggcgtcaagtactcgcccacatcg
ccgacgtactcgccgccatcgccctcgtacgacggatcaccgggatcgccccaatacacg
cctggatcgccgcagtactccccggcctcgcccaagtactcgcccacatcgccgctgtac
tcgcccagctccccccagcactcgccgtcgaaccagtacagccccaccgggtccacgtac
tcggccaccagtccaaggtattcgccgaacatgtccatctattcgcccagcagcaccaag
tactcgcccacatcgcccacttacacgcccacggcccgcaactactcgcctacatcgccg
atgtactcgccgacggcgccatcccactacagtcccacgagtcccgcgtactcgcccagc
agtcccacgttcgaggagagcgacgattga
DBGET
integrated database retrieval system
