Drosophila ananassae: 6504263
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Entry
6504263 CDS
T01059
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
dan
Drosophila ananassae
Pathway
dan03013
Nucleocytoplasmic transport
dan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6504263
03015 mRNA surveillance pathway
6504263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dan03019
]
6504263
Enzymes [BR:
dan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
6504263
5.6.2.5 RNA 5'-3' helicase
6504263
Messenger RNA biogenesis [BR:
dan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
6504263
mRNA cycle factors
Common to processing body (P body) and stress granule
6504263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
DEAD
Helicase_RecD
AAA_22
AAA_16
NPHP3_N
UvrD-helicase
ATPase
nSTAND3
SRP54
AAA_32
AAA_10
AAA_5
Motif
Other DBs
NCBI-GeneID:
6504263
NCBI-ProteinID:
XP_001967370
UniProt:
B3N1D5
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MSVDTYAPSSALSFLDMDENELLPGADTQPTQYDYRDFTMPSTSQSQTQGEQLELHPRRS
GGDSHPRLASITNDLGDLQFEEEDDEAGSSYVKELPAHACKYCGIHDPATVVMCNNCKKW
FCNGRGSTSGSHIINHLVRAKHREVTLHGDGPLGETILECYSCGVRNVFVLGFIPAKADS
VVVLLCRQPCAAQNSLKDMNWDQEQWKPLITDRCFLPWLVKQPSEQGQLRARQISAAQIN
KLEELWKDNIEATFQDLEKPGIDSEPAQVLLRYEDGYQYEKTFGPLVRLEADYDKKLKES
ATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELYNPWSEIGHVIKV
PDNFGDDVGLELKTSSNAPVKCTSNFSVDFIWKCTSFDRMTRALRNFAMDRNSVSNYIYS
RLLGHGRPDANDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKT
VTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFL
ALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRSLKRGTENQLLEAADVICCTCVG
AGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG
LSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWP
QPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQR
AYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLN
VALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKLV
NNLNIGAHFMTTMIADAKEVMVPGSIYDRSGSTVYSQSRQLPNQAVNGGQYGNTSAPYGG
SPLGYGAPTSGSIMSFGLGGGSGAAAGGNNNYGASNAGPSWAAAQLHHDSIGYISNEHGA
AALGNMPVPVGMFMNMSNLPPRFYNQHQQAIMAAKQNRAMQQPGNFMGGMGASGGSMGGN
KKSQKPMKSRATGGQMGGTAMMGGAGIGGLVGAGASVTPFSQQPAPLSLQMTQPGGFALS
QQPELSQDYGQISQMDGLLSQDVAFNVSGERSLNQFSQPY
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggacacgtatgcgccgagctcggcgctctcgttcctggacatggacgagaac
gagctgctgccgggcgcggacacgcagccgacccagtatgactaccgtgacttcactatg
ccgtccacttcgcagagccaaacgcaaggcgagcagcttgagctgcacccgcgccgctct
ggaggcgactcgcaccctcgccttgccagcatcaccaatgacctgggcgacctgcagttc
gaggaggaggacgacgaggccggcagttcgtatgtcaaggagctgcccgcacacgcatgc
aagtactgcggaatccacgaccccgccacggttgtgatgtgcaacaactgcaagaagtgg
ttctgcaacggccgcggaagcacttccgggtcgcatatcatcaaccatctggtgcgtgcc
aagcaccgtgaggtgactctgcacggcgatggtccgcttggcgagacaattctcgagtgc
tactcgtgcggcgtgcgaaacgtctttgtgctgggcttcatcccggccaaggcggactcg
gtggtggtgcttttgtgtcgccagccgtgtgccgctcagaattcgctgaaggacatgaac
tgggaccaggagcagtggaagcctctgatcaccgaccgctgcttcctcccgtggctggtg
aagcagcccagtgaacaaggccagctgcgggcgcgccagatttcggcggcccagataaac
aagctggaggagctgtggaaggataacatcgaggccacgttccaggacttggagaagccc
ggcatcgactcggaaccggctcaggtgctgctgcgctacgaggacggttaccagtatgag
aagaccttcggtccgctggtccggcttgaggccgactacgacaagaagctgaaggagtcg
gccacccaggagaacatcgaggtgcgctgggacgtgggcctcaacaagaagaccatcgcc
tacttcactttggccaagacggactccgacatgaagctgatgcatggcgacgagctacgg
ctgcggtacgtgggcgagctctacaacccgtggagcgagatcgggcatgtgattaaagtg
cctgataacttcggcgacgatgtcggcctggagctgaagacctcttcgaatgcgccggta
aagtgcaccagcaacttctcggtggacttcatctggaagtgcacctcattcgaccgcatg
actcgcgctctccgcaacttcgccatggaccgcaattcggtctccaactacatatattct
cgtctgctgggccacggccgaccggacgccaatgacgaggtcctgttccgcggcccccag
cccaagctgtacagtgctccgcatctgccggacctcaaccgaagccaggtgtacgccgtg
aaacatgcgctccagcgacccctttcgctgattcagggtccgcccggcactggaaaaact
gtcacctcggccacaattgtgtaccagttggtgaagcaacacggcggcaccgtgcttgtg
tgcgctcccagcaacacggccgttgaccagctcaccgagaagatccacaggaccaatttg
aaagtggtgcgggtttgcgccaagagccgcgaagccatcgacagccccgtaagcttcctg
gccctgcacaaccagatccgcaacatggagaccaactcggagctgaagaagctacaacaa
ctgaaggacgaaacgggcgaactgagctcggcggatgagaagcgttaccgcagcttaaag
cgcggcaccgaaaaccagctgctggaagcggccgacgtcatctgttgcacgtgcgtgggt
gccggcgatgggcgcctgtcccgcatcaagttcacctccatcctcattgacgagtcgatg
cagtcaacggaacccgagtgcatggttccggtggtgctgggcgccaagcagctaatcctc
gtcggcgatcactgccagctgggaccagtggtaatgtgcaagaaggcggctcgcgctgga
ctctcccagagcctgttcgagcgcctggttgtgctgggcatccggcccttccgactagag
gttcaataccgcatgcaccccgaactctcgcagtttccgtccaactttttctacgaggga
tcgctgcaaaacggcgtctgcgctgaggatcgtcgcctcaagctggacttcccatggccg
cagccggagaggcctatgttcttcctggtgacacagggccaagaggagatcgccggctcc
ggcacgtcttttctcaatcgtacagaggcggccaacgtggagaagatcacgactcggttc
ctgaaggcgggtatcaagccggagcagattggtatcataacaccctacgagggccagcgg
gcgtatctggtgcagtacatgcagtaccagggcagccttcactcgcggctctatcaggag
atcgagatcgctagcgtcgacgcgttccagggccgcgagaaggatatcatcatcatgtcg
tgcgtgcgctctaatgagcgccagggcatcgggttcctgaacgacccgcgtcgcctcaac
gtggcgctcactcgcgccaagtacggcatcatcatcgtgggcaaccccaaggtactggcc
aagcagcagctgtggaaccatcttctgaacttctacaaggaccggaaagtgcttgtggag
gggtccctgaacaatctcaaggagtcgctcatccactttcagaagcccaagaaactggtc
aacaacctgaacatcggcgcccacttcatgaccaccatgattgccgatgccaaggaggtg
atggtgcctggctccatatacgaccggagcgggagcactgtctatagccaaagtcgtcag
ctgcccaaccaggcggtcaacggcggacaatacgggaacaccagtgccccttacggcggt
tctccccttggatatggcgccccaacctccggttccattatgagcttcggcctgggagga
ggatctggcgccgctgctggtggcaacaacaactatggtgcgtccaacgccggccccagt
tgggcggctgcccaactgcatcacgactccatcggctacatatccaatgagcacggcgca
gctgctctgggcaacatgcccgtgcccgtgggaatgtttatgaacatgagcaacctgccg
ccgcggttctacaaccaacaccagcaggctatcatggctgccaagcagaaccgggccatg
cagcagccgggcaacttcatgggcggcatgggcgccagcggcggctcaatgggcggcaac
aagaagtcccagaagccgatgaaatcacgggcgaccggcggccaaatgggtggcactgcg
atgatgggaggagcgggtatcggcggactggttggagccggggcgtccgtaacgcccttc
agccaacagcctgcaccgctgtcgctgcagatgacccagccaggcggcttcgctctttcc
cagcagccggagctgtcgcaggactacgggcagatctcccagatggacggtctgctttcc
caagatgtggcctttaatgtgtccggcgaacgcagtttgaaccaattctcgcagccttat
tga
DBGET
integrated database retrieval system
