Desulfobacca acetoxidans: Desac_0952
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Entry
Desac_0952 CDS
T01454
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dao
Desulfobacca acetoxidans
Pathway
dao02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Desac_0952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dao02000
]
Desac_0952
Enzymes [BR:
dao01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Desac_0952
Transporters [BR:
dao02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Desac_0952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA
RsgA_GTPase
DEAD
ABC_ATPase
AAA_25
Zeta_toxin
AAA_30
TsaE
AAA_29
nSTAND3
DUF4605
AAA_33
AAA_5
HUTI_composite_bact
nSTAND1
MMR_HSR1
NB-ARC
AAA_24
DUF3584
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AEB08822
UniProt:
F2NC27
LinkDB
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Position
complement(1101632..1103416)
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AA seq
594 aa
AA seq
DB search
MSQFRQLYFRLLQQVKPFWWRLLIAMLAMLGVSGITALIAFLIKPAMDDIFFGKRLDMVI
WLSGGVIILYFLKGLFSYTHEYLMSYVGGMIITNLRDALYRQYMALPQLFFDRTATGLLV
SRVTFDVNLLQSSVSRVVTNFLKDVFTIIGLVGVIFYREWRLALIAMIVFPAAVLPIIKF
GRRLRRISTSSQVSMSRLNTHLQETLVGSNIVKAFGREDYEIERFYQENLKFFRLLMKNV
STKAISSPVMELLGGFGIAAIMAYGGYQVIQGTSTPGTFFSFLAALLMLYQPIKSLSNIN
NSLQEGMAAARRVYEILDLEPEIRDRPNAVTLPPIAREIRFAQVDFTYEDRLALQNINLT
VKKGEVVALVGPSGAGKTTLVNLVPRFYEVTRGAITIDNHDIREVTLRSLRGQIGVVTQQ
TFLFNDTVRNNIAYGRPEAGEAEIIQAAQAAFAWDFIQNLPQRLDTIIGEQGVMLSGGER
QRVAIARALLKDPPILILDEATSALDSEAEREVQKALDNLIQGRTTLVIAHRLSTIRDAD
RIVVLDNGRIVEAGRHAELLAKGGVYAKLYFLQFGSEEEEPATGVPELQASGLV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaattccggcaattatatttccgtctgttacagcaggtgaaaccattctggtgg
cggctgcttatcgccatgttggcaatgttgggcgtctccgggatcaccgccctgattgcc
tttctgatcaaaccggcgatggatgacatctttttcggcaaacgtctcgacatggtaatc
tggctttccggtggggtaattatcctgtatttcctcaagggtctgttctcctacacccac
gaatacctgatgagttatgtcggcggtatgattattaccaacctgcgcgacgccctctac
cggcaatatatggccctgccgcagctcttttttgatcgcaccgctaccggcctgttggtt
tcccgggtaacctttgacgtcaacctgttgcagagctcagtttcccgggtggtcactaat
ttcctcaaagacgtctttaccatcataggtctggtaggagtgattttttatcgggagtgg
aggctggccttgatcgccatgatagtctttccggctgcagttctgcccatcatcaaattc
ggcagacgtctgcggcgaatctccacttcgagtcaggtctcgatgagtcgcctgaacacc
cacctgcaagaaaccctcgtgggcagcaatattgtcaaggctttcggtcgcgaggactat
gaaattgagcgattctatcaggaaaatctaaaattcttccgtctgctgatgaaaaatgtc
tccaccaaggccatttcgtcgccggtgatggagcttttgggaggatttggcatcgccgcc
atcatggcctatggcggctatcaggtaatccagggaacttccactccaggtacttttttt
tcctttctggcggccctgctgatgttgtatcaacccatcaagagtttgagcaacatcaat
aattctttgcaggagggcatggcggcggccagaagggtgtatgagatcttggacctggaa
ccggagattcgagatcgcccgaacgccgtgaccctgcccccgatagccagggaaatccgc
ttcgcgcaggttgatttcacttacgaagaccgactcgctctacagaatatcaatctgacc
gtaaaaaaaggtgaggtggtagccctggtgggtcccagcggggctggcaagactaccttg
gtaaatctggtaccgcgcttttacgaagtcacccggggagctatcaccattgataatcat
gacatccgagaggtgactctaagatcgctgcggggtcagatcggtgttgtaacgcagcag
acgtttctctttaatgacaccgtacgcaacaatatcgcctatggtcgtcccgaggcaggc
gaggcggaaatcattcaggcggcccaggcggcctttgcctgggactttattcaaaacctg
ccccagaggctggacacgatcatcggcgaacagggggtaatgctctccggcggtgaacgt
cagcgggtggccatcgcccgcgccttgcttaaagacccccccattcttattctagatgaa
gcgacttcggccctggattccgaagccgagcgggaggtccaaaaggccctggacaacctg
attcaaggccggacaactctggtcattgcccaccgactgtcaaccatccgggatgcggat
cgcattgtggtgttggacaacggtaggatcgtcgaagccgggcggcatgccgagctgttg
gccaagggcggggtatacgccaaattatacttcctgcaattcgggtccgaggaggaggaa
cccgccaccggggttcccgagttacaggccagcggtttggtgtaa
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