Desulfobacca acetoxidans: Desac_1428
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Entry
Desac_1428 CDS
T01454
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dao
Desulfobacca acetoxidans
Pathway
dao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Desac_1428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dao03021
]
Desac_1428
03400 DNA repair and recombination proteins [BR:
dao03400
]
Desac_1428
Enzymes [BR:
dao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Desac_1428
Transcription machinery [BR:
dao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Desac_1428
DNA repair and recombination proteins [BR:
dao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Desac_1428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AEB09283
UniProt:
F2NJB1
LinkDB
All DBs
Position
complement(1643344..1644354)
Genome browser
AA seq
336 aa
AA seq
DB search
MHKNWTDLIRPKKLEIDPDTHNRFYGKFTCEPLERGFGATLGNALRRVLLSSLRGTAITS
VKIKGIHHEFSPIPGVIEDVTEVILNLKAVRFKMHSQEEKVIYLEAREEGEVTAGAFKTD
GTIEILNPDSHIATLARDGELFIEATVKSGKGYRPAEENKQEGQSIGTIPVDAIFSPIRK
VNHIVTQARVGQQTDYDKLTLEVWTDGSVSPEDAVALAAKILKEQLTIFINFEEPCEETE
EKPATEISRLNENLFRPVNELELSVRSANCLKNANIRFIGELVQKSEAEMLKTKNFGRKS
LNEIKEILSEMGLNLGMKLENFPPREGVPEGKEGLS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagaactggaccgacttgattagaccaaaaaagctagagatcgatcccgataca
cataaccgtttttacgggaagtttacctgtgaacccctagaacgagggtttggggctacc
ttgggcaatgccctgcgccgcgtcttgctttcctcactcaggggcactgcaatcacctcg
gtaaagatcaaggggattcatcacgaattttctcccatacccggggttattgaagacgtc
accgaggttattttgaatcttaaagcagtccgctttaagatgcactctcaagaagagaaa
gttatttacctcgaggccagggaagaaggggaagttacagccggcgctttcaagaccgac
ggcaccattgagattttaaaccccgacagccatattgccacgttggctcgagacggcgaa
ttatttattgaggccacggtcaaatccggcaaaggctaccgaccggccgaagaaaataag
caagagggacagtctatcggcaccatccctgtcgatgccatcttttcccctatccgtaag
gtcaaccatatcgtgacgcaggcacgcgtcggtcaacagacggattatgacaaattgact
ctggaggtctggaccgatggcagcgtcagccccgaagacgccgtggccctcgccgccaag
attcttaaagaacagcttactatctttatcaactttgaagaaccttgtgaggaaacagag
gaaaaaccggccaccgaaatcagccgactcaacgaaaatctctttcgaccggtcaacgaa
ctggagctttcggtacgttccgccaactgtctgaaaaatgccaatatccgttttatcggc
gaattagtgcaaaagagcgaagccgagatgctgaaaaccaagaacttcggccgtaaatcc
ctcaatgaaatcaaggaaattttatcggaaatgggactcaacctgggcatgaaattggaa
aattttcccccccgggaaggcgtcccggaaggaaaggaaggtttgtcatga
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