Desulfobacca acetoxidans: Desac_1763
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Entry
Desac_1763 CDS
T01454
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dao
Desulfobacca acetoxidans
Brite
KEGG Orthology (KO) [BR:
dao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dao03016
]
Desac_1763
Enzymes [BR:
dao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Desac_1763
Transfer RNA biogenesis [BR:
dao03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Desac_1763
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
WHD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
AEB09603
UniProt:
F2NHX7
LinkDB
All DBs
Position
complement(1969394..1971385)
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AA seq
663 aa
AA seq
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MENYQIVEFFEERKIYCAFVADDRGERLHVVTEHNREVNLPRKRVIHAAPWSAGASLSRH
ELVERLRAVGARRETLKQDINLFELWELLVNETEGLSAADLARTWYGDGVTSDQIAALGR
ALYEDRFYFKFKGNVWSPHPPEVVEGLQEQHRREEERRQELKTAAGWLRAAWESGNITDP
HWRERLLTVLQNMAVHGATHEDYELGKAYLEEAKLFKPDTPFKLLVKLGVFSPDENLDLH
RYETPQDFPAEIQEAALALCQKTAYPDPFAPWRVDLTGLQLFTIDGERTRDFDDALSLEK
IPEGWRLGIHITDVSTYIPLGTPLDQAALERGTSLYLPDRRIPMLPEALSENTLSLLAQH
PRRAVSFLVNLTAEGEIQNYSILLSMVQVSKRFTYHEVDYLLAQNERLAALHRLTACLRE
RRLSQGGVQLQFPDVTILTDASGEVRVEIEDTETPSHELVSEAMILANYLGAQYLAERKV
PVLYRSQAPPREELEKVETGSLFQLWQNRRRLSRVLLDLEPQPHWGLGLPVYTTISSPIR
RYLDLIIHRQLFAALCNQPTPYTREALEGLLTLLEPTLRRAALLKTRRLRYWLLKFLSQH
VGQKFSALILEKHPNRYRLLFLDILLESEMPAPSGHQFQPGETIFARIDRVVPQEDVLKV
SLA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattatcagatcgttgagttctttgaagagagaaaaatatactgtgcctttgtc
gcggatgaccgcggggagcgattgcacgtggtcaccgagcataaccgcgaagttaacctg
ccacgcaagcgagtaatccatgctgcaccctggtcagccggtgccagtctctcccggcat
gaattagtcgagcgcctgagagccgttggcgcccgacgggagactctgaaacaagacatt
aacctgttcgaactctgggagttgctggtaaacgaaaccgagggcttaagcgctgcagat
ctggcgcgtacctggtatggtgatggcgtgacctccgaccagattgcggctttgggccga
gctttgtatgaagaccggttctactttaaatttaagggtaatgtttggagcccgcatccg
cccgaagtagtggaaggattgcaggaacagcaccgccgtgaagaggaacggcgccaggag
ctgaaaaccgccgccggatggctgagagcagcctgggaaagtgggaacatcaccgatccc
cactggcgggaacgactcctgaccgtgctgcaaaatatggcggtgcacggtgcaacccac
gaggattacgagttgggcaaggcctatctggaggaagccaaactctttaaacccgatacc
ccttttaaactgttggtaaagttaggcgtcttcagcccggacgagaaccttgacctccat
cggtatgaaacacctcaggattttcccgctgaaattcaggaggcggccctggccctttgt
cagaaaaccgcatacccggatccttttgctccctggcgggttgatcttaccgggctgcag
ctttttaccattgatggcgaacgcacccgtgattttgatgacgccctcagtctggaaaag
attccggagggctggcggttgggcatccacatcaccgatgtctctacctacattccttta
ggcacccccctggatcaggcggcgctggaacggggaacgtccctctacctgccggatcgg
cgcatcccgatgctgccggaggccttatcggaaaacaccctgagcctgttggctcaacat
ccccggcgggccgtcagttttctcgtgaatctaacggcagagggtgaaattcagaattat
tccatccttctgagcatggtacaggtcagcaagcgtttcacttatcatgaggtagattac
ctgttggcccagaacgagaggctggccgccttacaccggctgactgcctgcctgcgggaa
cgccgtctcagccagggaggggtgcagttgcagtttccggacgtcactattttgacagat
gcttcgggagaagtgcgggtcgaaattgaggacacggagacccccagtcatgaattggtt
tccgaggccatgattctagccaactatctgggagcccagtatctggcggaacgcaaggtt
cccgtcctttaccgcagccaggcgccacctcgggaagagcttgaaaaggtggaaaccggt
tcgctcttccaactctggcaaaaccggcgccgattaagccgggtgctcctcgatctggaa
ccccagccccactggggactgggattgccggtgtacaccacgatcagctcccctatccgc
cgttatctggatctgatcattcaccgacaactgtttgcggccttgtgcaatcaaccgacc
ccttatactcgggaagcactggaagggctgcttactctcctggagcccaccctgcgtcgg
gcggctctgctcaagacgcggcggctgcgctattggcttttaaaattcttaagccagcac
gtcggccagaagttttccgccctgattctggagaaacaccctaatcgttatcggctgctc
tttctcgatatcttgctggaatccgagatgcctgctccttccggtcatcagtttcaaccc
ggtgagactatttttgcccggattgatcgggtcgttccccaggaggatgttttaaaagtc
agtctggcttaa
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