Desulfobacca acetoxidans: Desac_1867
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Entry
Desac_1867 CDS
T01454
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dao
Desulfobacca acetoxidans
Pathway
dao03420
Nucleotide excision repair
dao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desac_1867
03430 Mismatch repair
Desac_1867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dao03400
]
Desac_1867
Enzymes [BR:
dao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desac_1867
DNA repair and recombination proteins [BR:
dao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desac_1867
MMR (mismatch excision repair)
Other MMR factors
Desac_1867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
RecR_HhH
DEAD
HHH
Motif
Other DBs
NCBI-ProteinID:
AEB09705
UniProt:
F2NJQ0
LinkDB
All DBs
Position
complement(2091421..2093379)
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AA seq
652 aa
AA seq
DB search
MPQGSPESKRTHIDYQHELNPAQYEAVTLTEGPVLVIAGAGSGKTRTLVYRLAYLVEHGI
PPWNILLLTFTRKASQEMLHRASQLINRPLHQVSGGTFHAVCHGWLRRYGARIGYDCGFT
LLDRHDQGDLVRLLRDRLELKVSPGQFPRRQTIVEIFGALVNKNLDLETLLTREHPQFLT
QAPALTALNRLYQRHKREHQLLDYDDLLLEGRRLLTEHEDLRLSLSEGYRYIMVDEYQDT
NRLQAEIVKLLAFTHDNVMAVGDDSQSIYSFRGANFRNIMDFPSLFPGTRIIKLEENYRS
TQPILDLTNTIIAQASEKYTKCLFTQKKQGPKPVLLEAGGENEQSQLVCQSLAELRKQGT
SLRQMAVLFRSAYHSFDLEIELLRQQIPFMKFGGFKFMESAHIKDLLAHLRVAANPRDSL
SWNRLLQLVPGIGKKSAQKFLTQLPQEGFSLQGALQWLTSQKGARAKAALQPLIELLEQL
QSPDLAPATRLNMALSYYEPILKTHFDDYPKRLRDLEHLLTITARYGSLGDFLNDLTLEP
PASMAEITAEPGEYLTLSTIHSAKGLEWDAVFIIWAAEGRFPSVYSQEREAELEEERRLM
YVAATRARRYLYVMYPKVSYTKYLGTTFNAASRFVRDLPRSLLEPLKVEPRW
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaggttctcccgaatctaaaagaactcacattgactaccaacatgagctgaat
ccggcccaatatgaagcggtcaccctcaccgagggcccggtgttggtcattgccggggct
ggcagcggcaagactcggacgttggtctaccggctggcctatctggtggaacacggcatt
cctccctggaacatcctgctgcttacctttacccgtaaggcctcccaggaaatgttgcac
cgggcctcgcagttgatcaaccggccgctccatcaggtctccgggggcacattccatgcc
gtctgccacggctggctccgccgttatggcgccagaataggatatgactgcggttttacc
ctactggatcggcatgaccagggtgatctggtgcggttgctgcgggatcgcttggagcta
aaagtcagccccggtcagttcccccggcggcagaccatcgtcgaaatcttcggcgctctg
gtcaataaaaacctggacctggaaaccttgttgacccgagaacacccccagttccttacg
caggcccccgccctgactgctcttaacaggctctaccaacgccacaaacgcgagcatcaa
ctcttggactatgacgatctgctcctggaaggccgccgtctgctgaccgagcacgaggat
ctgcgcctctctctgtcggaagggtatcgctacatcatggtggacgaataccaggacacc
aaccggctgcaggccgaaatcgtcaagctcctggccttcacccacgacaacgtcatggcg
gtgggcgacgactcgcaatcgatttactctttccggggggctaattttcgcaacatcatg
gattttccaagtctttttcccggaacccgcatcatcaaactggaggaaaactatcgcagc
acccagcccatcctcgacctgaccaacaccattattgcccaggccagcgaaaagtatacc
aagtgtttgttcacccaaaaaaagcagggtcctaaaccggtcctgcttgaggccggcggc
gaaaacgaacagtcccaacttgtctgtcagagcctggcggaactgcggaaacagggcacc
tcgctccggcagatggcggtgctcttccggtcggcctaccactcgttcgacctggagatc
gaactgctgcggcaacagatacccttcatgaagttcgggggctttaaatttatggaaagc
gcccatattaaagatctgttggcacacctgcgggtggccgccaacccgcgcgattccttg
agttggaaccggctgctgcagttggttcctggaatcggtaaaaagagcgcccaaaagttc
ctgacccagttaccgcaggaggggttctccctgcaaggggctttgcagtggctgacctct
caaaaaggcgcccgggccaaagcggccttgcaacccctgatcgaactgctggagcagctc
caatctcccgatttagccccggccacccgactcaatatggccctgtcctattacgagccg
atcctcaagacccactttgatgactatcctaaacgtctgcgggatttggagcatctgttg
acaatcaccgcccgctacgggtctttgggcgatttcctgaacgatctgaccctggaaccc
cccgccagtatggcggaaattaccgccgaaccgggagaatacctcaccctttccaccatt
cattcggccaaagggctagagtgggacgcggtctttatcatctgggccgccgagggacgt
ttcccttctgtctattctcaggaacgtgaagcagaattggaagaagaacggcgattgatg
tacgtagccgccactcgggctcggcgatatctgtatgttatgtatcccaaggtcagctac
accaagtacctcgggacaacgttcaacgccgcctcccgttttgtccgggacctgccccga
tccctgttggagcctctgaaggtagaacccagatggtag
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