Desulfobacca acetoxidans: Desac_2143
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Entry
Desac_2143 CDS
T01454
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dao
Desulfobacca acetoxidans
Pathway
dao03030
DNA replication
dao03430
Mismatch repair
dao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desac_2143
03430 Mismatch repair
Desac_2143
03440 Homologous recombination
Desac_2143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dao03032
]
Desac_2143
03400 DNA repair and recombination proteins [BR:
dao03400
]
Desac_2143
Enzymes [BR:
dao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desac_2143
DNA replication proteins [BR:
dao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desac_2143
DNA repair and recombination proteins [BR:
dao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desac_2143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
DNApol3-delta_C
AAA_5
DUF6587
NACHT
DUF815
AAA_18
AAA_28
Mg_chelatase
RNA_helicase
AAA_22
AAA_7
RsgA_GTPase
SKI
Motif
Other DBs
NCBI-ProteinID:
AEB09972
UniProt:
F2NDA6
LinkDB
All DBs
Position
2388568..2389584
Genome browser
AA seq
338 aa
AA seq
DB search
MLFRDILGQNRVIGFLRQGLATGAMPHALLFLGAEGVGKSSTAQALAQALNCEQRQTDQD
ACGHCRSCRMFTAGGHPDFLQIKPSGEGGQPQIKIEQIRELRRQLGYPPLAGNWRVVLLK
PAETLNEAAANALLKTLEEPPAGNVLILTAIGERDLLPTIVSRCRRLTFGAIPQSILIQE
LKRRKGLSPEQAALAAAMHYGSLGLALQEDFQQLLDQRNQTVKELEQLEHGSVGEVLQWA
TQKSKKDAGLDKFIILGRLWYRDLLALKCHARPEQLLNWDRSADLADQQRSLTTEAILTR
LDVLSRLPQQLRANLNIELCLNTFTLRWRSPDVVAVSG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgttatttagagatatcttaggacagaatagggtcattgggtttttgcggcaggggctg
gccaccggtgcgatgccccatgccctgctctttttgggggccgaaggagtcggcaaaagc
agcaccgcccaggccttggctcaggccctcaattgcgaacaacggcaaaccgatcaggac
gcctgcgggcattgccgctcgtgtcggatgtttaccgccggcggccaccccgatttcctg
cagatcaaacccagcggcgaggggggccaaccacagatcaagatcgaacagatccgggag
ctgcggcgtcaattaggatacccccccctggctggcaactggcgggtggtgctattgaaa
cctgcggaaaccttgaacgaagccgcagccaacgccctgctgaagaccctggaagagccc
ccggcaggaaatgtccttatcctgaccgcgataggcgaaagagatctgctgcctactatt
gtctcgcgttgccgccgcctgactttcggcgccatcccgcaatccattctgattcaggag
ttgaaacgccggaaaggtctaagcccagagcaggcagccttggcggcagccatgcattac
ggatcgctgggactggcgttgcaggaagattttcagcagcttctagatcaacgcaaccag
acagtaaaggaactggaacaactggaacatggttccgtcggcgaagtactgcagtgggcc
acccagaaaagtaagaaagatgccggtctggataaatttatcatattgggccggctgtgg
taccgggacctgttggccctgaaatgtcacgccagacctgagcaattattgaattgggat
cggtcggccgatctggcagatcagcaacggtcgctgacgaccgaggcaatattgacccgg
ctcgatgtcctgagcagactgccccagcagttgcgggccaatttaaatattgaactctgt
ctgaacacttttaccttgcgctggcgttcaccagacgtcgttgcggtttcaggataa
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