Desulfobacca acetoxidans: Desac_2293
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Entry
Desac_2293 CDS
T01454
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dao
Desulfobacca acetoxidans
Pathway
dao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Desac_2293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dao03019
]
Desac_2293
03016 Transfer RNA biogenesis [BR:
dao03016
]
Desac_2293
Enzymes [BR:
dao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Desac_2293
Messenger RNA biogenesis [BR:
dao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Desac_2293
Transfer RNA biogenesis [BR:
dao03016
]
Prokaryotic type
tRNA degradation factors
Desac_2293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
S1_2
OB_RRP5_4th
Par3_HAL_N_term
DUF3016
DUF7357
Motif
Other DBs
NCBI-ProteinID:
AEB10117
UniProt:
F2NFJ8
LinkDB
All DBs
Position
2547200..2549335
Genome browser
AA seq
711 aa
AA seq
DB search
MAQQTEAFTKIMAKTFEVEVGGRILAFEIDKMAAQASGAVFARYGDTGVLVTAVASDRLR
EGIDFLPLTVDYLEMSYAAGRIPGGFFRREIGRPSEKETLTSRLIDRPIRPLFPKGFFHE
LQIIATVLSVDMENDPDIIALNGASAALAISDIPFQGPIAAVRMGKVGGELMVNPTISQL
KESTLNLIVAGSNDALVMVEGGAELASEEEILEALFTAHAEMQPILRLQEQMRVEAGKTK
RPVSEIIIDETLKTRVEELSRALILQAIAQAEKKVRHQAMEDGLQTVLTTLESEYEGREK
EITGFYHDLEKTLVRDLVLNQKRRIDGRSYTDIRPISCEVGLLSRTHGSALFSRGETQAL
AVATLGTVSDEQRIETLTGDTFKAFMLHYNFPPYSVGETRMLRGPSRREIGHGALAERAL
SRVLPQPEEFPYTIRVVSEILSSNGSSSMATVCGGSLAMMDAGIPIKAPVAGVAMGLIKE
ENNIAILSDILGDEDHLGDMDFKVAGTAAGITALQMDIKIGGINREIMSQALHQAREARL
HILSRMNEAIDQPRTQLKENAPKIVVMTINPDKIREVIGPGGKTVKNIVAVTGAKIDIED
DGRIHIASPDALAANQAIRMIQELTQEPEIGQLYRGKVKKIVDFGAFVEILPGTDGLVHI
SELDKQRVKKVTDILKEGDEVLVKVLDVDRQGKIRLSRKAALDLDQDSVNP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcaaacggaggcgtttacaaagattatggcaaaaacctttgaagtagaggtt
ggaggaagaattctggcctttgaaattgacaaaatggcggctcaggccagcggcgcggta
tttgcccgttacggcgacaccggggtactggtaactgcggtcgcgtcagatcgcctccgc
gaaggcatcgactttctgcccctcacggtggattatttggaaatgtcttatgcagccggc
cggatacctgggggtttcttccgtcgggagattggccgtccgagtgaaaaggagaccctg
acctcacggctgattgatcgtcccatccgccctctgttccccaaaggcttctttcacgaa
ttacagattattgcgacggtgctctccgtcgatatggaaaacgatccggacattatcgcc
ttaaacggtgcctctgcggccctggcaatttcggatatcccctttcagggtccgattgcc
gcagtccggatgggcaaagttggcggcgaactgatggtcaacccgactatttcacaactt
aaagaaagcaccctcaatcttatcgtcgccggctccaatgacgccctggtgatggtagag
ggtggggctgaactggcctcagaagaagagatcctggaggccctgttcaccgcgcacgcc
gagatgcagccgatcctgagattgcaagagcagatgcgggtcgaagcgggcaaaaccaaa
agacctgtttcagagataatcatcgatgagaccctgaaaaccagggtggaggaactgagt
cgggcgttaatcctccaagctatagcccaagcagaaaaaaaggtccgccaccaggcgatg
gaggatggtctgcagacagtcctcacaactctggagtctgaatacgaaggacgtgaaaaa
gaaattaccggattttatcatgacttagaaaagaccctggtacgggacctagtgcttaat
caaaaacggcggatcgacggccgcagctataccgacattcgacccatctcctgtgaagta
gggctcctcagccggacgcacggttcagcgttgttttcccggggcgaaacccaggccctg
gctgtcgccaccttgggaaccgtctctgatgaacagcgtattgagacgcttaccggagac
accttcaaggcttttatgctgcattataatttccctccttacagcgtcggcgaaacccgg
atgctgcggggaccaagccgccgcgaaatcggtcatggagccctggcagagcgggccctc
agtcgggttctgccccaacccgaggaatttccttatactattcgcgttgtttccgaaatc
ctttcctcaaatggttcttcctccatggccactgtctgcggtggctccttggccatgatg
gacgccggcattcccattaaagctccggtggccggggtggccatgggactcattaaagag
gagaataatatcgccatcctgtctgacatcttaggcgacgaagatcatttaggggatatg
gattttaaagtagcgggcacggctgcgggtatcaccgcccttcagatggacatcaagatc
ggcggtatcaatcgggagatcatgagccaggcgctgcaccaggcacgggaagccaggctg
cacatcctgagtcgaatgaatgaggccatcgaccagccacggactcaactcaaagagaac
gctcctaaaatcgtcgtgatgaccattaatcccgataagattcgggaggtaatcggaccc
ggcggcaaaacggtgaaaaacatcgtggctgttacgggcgccaaaattgacatcgaagat
gatggccggattcatatcgcctcgccggacgccctggctgccaaccaggccattcgaatg
atccaggaactcacccaagaaccggaaattggacagttataccgcggaaaggttaagaag
attgtcgatttcggtgccttcgtagagatcctgcccggcaccgacggtctggtccacatc
tcggaattggataaacagcgggtcaaaaaggtaaccgacatcctcaaagaaggcgacgaa
gtcctggtaaaagtgttagatgtcgatcgacagggaaaaatccgcctgtcacgtaaagcg
gcgttggatctcgatcaggattcggtaaatccttaa
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