Denitrovibrio acetiphilus: Dacet_0366
Help
Entry
Dacet_0366 CDS
T01189
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dap
Denitrovibrio acetiphilus
Pathway
dap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dacet_0366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dap03021
]
Dacet_0366
03400 DNA repair and recombination proteins [BR:
dap03400
]
Dacet_0366
Enzymes [BR:
dap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dacet_0366
Transcription machinery [BR:
dap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dacet_0366
DNA repair and recombination proteins [BR:
dap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dacet_0366
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
BSH_RND
Motif
Other DBs
NCBI-ProteinID:
ADD67166
UniProt:
D4H382
LinkDB
All DBs
Position
382807..386895
Genome browser
AA seq
1362 aa
AA seq
DB search
MDRVSTLDKKKSQFFDAIRIKIASPEKILSWSSGEVTKPETINYRTFKPERDGLFCAKIF
GPVKDWECLCGKYKRMKHRGIVCEKCGVEVIQSKVRRERMGHIDLASPVCHIWFFKGTPS
RIGSILDLSIKDIERIIYFESYIVTDPKNTPLKERELLTEDRYRKLVEELGIGSFEAKIG
AEAIKDLLKKVDLDLLLIELKEELRDTTSMQKKLKLAKRLRVVEAFRKSGNKPEWMILDV
LPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKKLMELNAPEIIIRNEKRMLQE
AVDALFDNGRRGRVIRSSNKRPLKSLSDMIKGKQGRFRQNLLGKRVDYSGRSVIVAGPTL
NMHQCGIPKIMALELFKPFLYYKLEKERGIASTIKQAKKMVEEQRPEVWDVLEEVIKEHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIRLHPLVCPAFNADFDGDQMAVHVPLSYEAQLEA
RTLMLASYNILSPAHGKPLAVPTQDMVLGIYYLTREMRNAIGAGKTFSSTNEVMIALDHG
KVDMHAEIKVRINGKYYDTIPGRIILYSIVPEGIEFDVVNKLFGKKDLVTLVDTVYKRLG
NYHTVNFLDALKNLGFSYAAKAGYSICIDDLIIPAEKQDLIDQANTKVREIDEHYREGAL
TSGERYNQIIDTWSTTNDTITDKLMKTIQNIGGDKSKTEKRERFYNPIYVMAHSGARGSK
AQISQLAGMRGLMAKPSGEIIETPIISNFREGLTVLQYFISTHGARKGLADTALKTANSG
YLTRRLVDVAQDVIISIDDCQTIKGIEISALMEGSEIVESLGERIYGRYTLEDIYDTVTD
DLIVEGNSLITGDIVKKIERAGIDRVKVRSVLTCEAKHGACKYCYGLDLATRREVETGEA
VGIIAAQSIGEPGTQLTMRTFHIGGAASSSAEQSSLNAKIGGRIATEEMKIVDNRYGEPT
VLNRNGLLKIIDPEGRVLEKYNIAYGTKLHAKEGDLVKQGALIAEWDPYAAVIMTEFKGR
VAFGDIVEGETLKEDIDSITGLSQKVIISNTRGRKQPRVSIKDENNKTVQRYILPVGANI
MVEENDEILPGDIVAKIPRDTQKTKDITVGLPRVAELFEARKPKDPAVIAEIDGIVTIEN
TARGLRKLTITNEETGVKKSYNISVQRYINVHEGDRVKAGEALIDGLINPHDILAVLGEE
ALERYLVDEIQEVYRKQGVHINDKHIEVIARQMLKKIIVEDPGDSNFMPNEEVYKAEFVK
VYQETLDKGLRPPQGRSILQGITKAALNTQSFISAASFQETTRVLTDAACSGKLDELRGL
KENVIMGKLIPAGTGSKHICNTKYKFLRPNPEAETSASGEVK
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggatagagtgagtaccttggacaagaagaagtcacagttttttgatgctattcgtatt
aaaatagcatcccctgagaagatcctttcatggtcttcaggtgaagtgacaaaacctgaa
actattaactaccgtacattcaagcctgaaagagatggtttgttctgtgcgaaaatcttc
ggaccagttaaagactgggagtgtctctgcggtaagtataaacgtatgaaacacagaggc
atcgtatgcgaaaagtgcggtgttgaggttatccagtcgaaggtgagacgtgagaggatg
gggcatatcgacctcgcttctcctgtatgtcacatctggttctttaaagggacacccagc
cgtataggctccatacttgacctttctataaaagatatagagagaatcatctacttcgag
tcatacatcgttactgatcctaaaaatactccgctgaaagagcgtgagctgctgactgaa
gacagataccgtaaacttgtagaagagctgggtatcggatcttttgaagctaaaatcggt
gctgaggctatcaaagacctccttaaaaaagtcgatctcgaccttctgctcatagagctg
aaagaggagctccgtgataccacaagtatgcagaaaaagctcaagcttgctaaaaggctg
agagttgttgaggcgttccgtaaatccggcaacaaaccggagtggatgatacttgatgtt
ctgccggttattccgccggaacttcgcccgcttgttcctctggacggcggacgctttgca
acatccgaccttaacgacctttacagaagggttatcaacagaaataacagattgaaaaag
ctcatggaacttaacgctcctgagattattataagaaatgagaaacgtatgcttcaggaa
gctgtcgatgcactgtttgacaacggtcgtcgtggtcgggtgattcgcagctctaacaag
cgccctcttaaatccctttcagatatgatcaaaggtaagcagggtcgtttccgtcaaaac
cttcttggtaagagggttgactattcaggacgttccgttattgttgcgggacctaccctg
aacatgcaccagtgcggtattcctaaaataatggcgctggagcttttcaaacctttcctc
tactacaagcttgaaaaagagagaggcattgcctccacaattaaacaagctaaaaagatg
gttgaggagcagagaccagaagtatgggacgtgctggaagaggttattaaggaacatcct
gtaatgctcaatcgtgcccccacactgcacaggctcggtattcaggcatttgagcctgta
cttatagaaggtaaagctatccgtcttcaccccctcgtttgtcctgcgtttaacgctgac
tttgacggtgaccagatggctgtacacgtaccgctttcttatgaagcacagcttgaagca
cgtacgttgatgcttgcttcctacaacattttgtcccctgcgcacggtaaaccgcttgca
gttcctacgcaggatatggttctcggtatatattatctcacacgtgagatgagaaatgct
atcggtgcagggaaaactttctccagcacaaacgaagttatgatcgcactggatcatggc
aaagttgatatgcatgctgagatcaaagtacgtataaacggtaaatactatgacacaatt
cccggcaggataatactttactctattgttcctgaagggattgaatttgatgttgtgaat
aagctgtttggcaaaaaagatctcgtgacacttgtagacactgtttacaagcgtctcggc
aactaccatacagtaaacttccttgatgcactcaaaaaccttggtttcagctatgctgct
aaagccggttactccatatgtattgatgaccttatcatccctgctgagaagcaggatctt
attgatcaggcaaatacaaaagtgcgcgagattgacgaacactaccgtgaaggtgcactt
acatcaggtgagcgttacaaccagatcattgacacatggtctactaccaacgacactatt
acagacaagctgatgaaaactatccagaacatcggtggtgacaagtctaaaactgaaaag
cgtgaacgcttttataaccctatatacgttatggcgcactcaggtgcgaggggttctaag
gcgcagatttcacagcttgcagggatgagggggctgatggccaagccgtctggtgagatc
attgagacacctattatatctaatttccgtgaagggctgacagtacttcagtatttcatc
tctactcacggtgctcgtaaaggtcttgcggatacagcccttaagacagcgaactcaggt
tatcttacaagaagacttgttgacgttgctcaggatgttatcatatcaattgacgactgt
cagaccattaaaggtatcgaaatatctgcccttatggaaggttctgaaatagttgagtca
cttggcgagcgtatttacggacgttacacacttgaagacatttatgatactgtgacagat
gatcttatcgtagaaggtaactcacttatcacaggtgatatcgttaaaaagatagaaaga
gctggtatcgacagagtgaaggttcgctccgttcttacctgtgaggcaaaacatggcgca
tgtaaatattgctatgggcttgatctcgcaacccgcagggaagtagaaacaggtgaagct
gtgggtattatagcagcccagtccatcggtgaacctggtacacagcttactatgagaact
ttccacattggtggtgctgcgtcatcatctgctgagcagtccagccttaacgctaagata
ggtggccgtattgctactgaagagatgaagattgttgacaacagatatggagagccgact
gtacttaatagaaatggtttacttaaaatcatagaccccgaagggcgtgttcttgagaag
tataacatcgcttatggtacaaaacttcatgcaaaagagggcgatcttgttaagcagggc
gcacttatagctgagtgggatccttatgctgctgtaattatgacagagttcaaaggtcgt
gttgcattcggcgatattgttgaaggggaaactcttaaagaagatatcgactccatcaca
ggtctgtctcagaaagtaattatcagtaacacaaggggacgtaagcaacctcgtgtttct
attaaggatgagaataataaaactgttcagcgatacatcctccccgttggtgcgaacatt
atggttgaggagaatgacgagatcctgcctggtgatatagtggctaaaatacctcgtgat
actcagaagactaaagatattacagttggtcttcctagggtagcagagctttttgaagca
agaaaacctaaagatcctgcggttatcgcggagatcgacggtattgtgactatagaaaat
acagcaagaggtctcaggaaactgaccatcacgaacgaagaaacgggtgttaaaaagagt
tataatatttctgtacagagatacatcaatgtacacgaaggtgacagggtgaaagctggt
gaggcgctcatagatggtcttatcaaccctcacgatatccttgctgtactcggtgaagaa
gctctggaaagatacctcgtggatgaaattcaggaagtttatcgtaagcagggtgtgcat
attaacgacaaacacattgaagtaattgcacgtcagatgcttaagaaaatcatcgttgaa
gatccgggtgactctaactttatgcctaacgaagaagtctacaaggctgaattcgttaag
gtttatcaggagacacttgataaaggtctcagacctcctcaaggtagatctattcttcag
gggattacaaaagctgctcttaacacacagagttttatctctgctgcttcattccaggag
acaacaagagtgctcacggatgcggcttgttcaggtaagcttgatgaactgagaggactt
aaagagaatgttattatgggtaaactgatacctgccggtacaggttctaaacacatatgt
aacactaaatacaagtttctcagaccaaatccggaagcagagacatctgcatctggtgaa
gtaaaataa
DBGET
integrated database retrieval system
