Denitrovibrio acetiphilus: Dacet_0849
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Entry
Dacet_0849 CDS
T01189
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dap
Denitrovibrio acetiphilus
Brite
KEGG Orthology (KO) [BR:
dap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dap03032
]
Dacet_0849
03400 DNA repair and recombination proteins [BR:
dap03400
]
Dacet_0849
Enzymes [BR:
dap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Dacet_0849
DNA replication proteins [BR:
dap03032
]
Prokaryotic type
DNA Topoisomerases
Dacet_0849
DNA repair and recombination proteins [BR:
dap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dacet_0849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Capsid_pestivir
DUF3854
Zn_ribbon_recom
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ADD67629
UniProt:
D4H5K9
LinkDB
All DBs
Position
879460..881808
Genome browser
AA seq
782 aa
AA seq
DB search
MPKNLVIVESPAKARTIEKYLGRNFKVLASVGHVKDLPASSLGVDLDNDFEPKYSIIRGK
KKIIDELKKVANSAENIYLAPDPDREGEAIAWHIAEELGKKNKGKIYRVLFNEITKKGIE
DGIKNTGPINENRTNAQQARRILDRLVGYLVSPLLWKSLKYGLSAGRVQSVALRLLVERE
EEIEKFKPEEYWLIDVTFKGGQKALLKARLEKKNGKKYRVPNGEEAEAVLAALKAGSYNV
NEVIRKEVFERAPLPFITSKLQQEAARKLSFSAKRTMMLAQRLYEGIELGSEGPVGLITY
MRTDSTRVSPDATNEARGYIEKQYGKEFLSKGVKGGSKKKNVQDAHEAIRPTSVAITPES
VKKILDTDQYKLYKLIWDRFVSSNMADAVYDQNTIHIANGPYLLKSQGKVMKFPGFQTLY
IEGVDESKEKDQEVIFDVKEGETLNPEKHDSKQMFTQPPARYSEATLVKTLEAEGIGRPS
TYASIISTLIDREYANMEEKRFKPTELGRVVCSLLIANFDRIFEPKFTAGMEEDLDSVEA
GELTWKGVLRDFYAKFKPELEKAEKQFSANLKIEMKCPVCEKDLTIKYGRNGNFVACTSY
PECKFTSNYERLEDGSFKLVPKEEDKPSGIECEKCGKELVFKKTRFGEVLACPGYPECKN
IKNYVTLPDGEIKILAAGEEIGTPCPKCEAGLTIKGGRNGMFIGCKNYPDCDFTANMEVN
EQGDIIPKYDKVDENVKCEKCGKPMVLKKSRRGKFFACTGYPECKNAKSTIVLEDGTISV
KE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaaatctagttatagtggaatcacccgccaaagcgcggacaatcgaaaaatac
ctcggaagaaactttaaagtgcttgcgtctgtggggcacgtcaaagacctgccggcaagc
agccttggtgttgacctcgacaatgattttgaacctaaatactctattatcagagggaag
aaaaaaatcatagacgagcttaaaaaagtagcaaattctgcggagaatatctatctcgcg
cctgaccccgaccgtgaaggggaggctattgcatggcacatagcagaagagctggggaaa
aagaacaaaggtaaaatttaccgtgtactctttaatgagattaccaaaaaaggtatcgaa
gacggtatcaaaaacaccggtcccataaacgaaaacaggacaaatgcacaacaggcgaga
cgtatcctcgacagattagtcggatatcttgtcagcccgcttctgtggaaatcccttaaa
tacggactttctgccgggcgagtgcagtctgttgctctcaggcttcttgtggagcgtgag
gaagagattgaaaagtttaaaccggaagagtactggcttattgacgttacctttaaaggc
ggtcagaaggcactccttaaagcaaggcttgagaagaagaatggtaaaaaatacagagtt
cctaacggcgaagaggccgaagctgttctggctgctctgaaagccggttcttataacgtt
aacgaagttatccgcaaggaagtctttgaacgtgcacctctcccttttatcacctcaaag
ctgcaacaggaagccgcaaggaaacttagtttctctgcaaagcgtactatgatgcttgcc
cagcgcctttacgaaggtatagagctcggcagtgaaggacctgtgggtcttatcacatat
atgagaacggactctacaagggtttctcctgatgctacaaacgaggcgagaggatatatt
gagaaacagtacggaaaagaatttctctctaagggtgtgaaaggcggatcgaaaaagaaa
aacgttcaggatgcccacgaagcaatacgcccgacatctgtggcgatcactcctgaaagc
gtcaaaaaaattctcgatactgaccagtataaactttacaaactgatatgggatagattt
gtgtccagcaacatggcggatgctgtctatgaccagaacacgatacatattgcaaacgga
ccctatctgcttaagtcacaagggaaagtaatgaaatttcccggctttcagacactctat
atcgaaggtgtcgatgagagcaaagagaaagatcaggaggtcatctttgatgtaaaagaa
ggtgagactcttaatcctgaaaaacatgacagcaagcagatgtttacacagccgcctgca
aggtattctgaagcgacacttgttaaaacacttgaagctgaagggataggtcgcccgtca
acttatgcttctattatttcaacactcatcgacagagagtacgcaaatatggaagagaaa
cgctttaagccgacagagctggggcgtgttgtctgctcacttctgatagcaaactttgac
cgcatatttgaacctaaatttacagcaggtatggaagaggatctggacagtgtggaagcc
ggcgagcttacatggaaaggtgttctcagagatttctatgctaaatttaaacctgagctt
gaaaaagcggagaagcagttttccgccaatctgaaaatagagatgaagtgtccggtatgc
gaaaaagaccttaccataaaatacggacgcaacggcaattttgtggcgtgcacctcttac
cctgagtgtaagtttacgtctaattatgaacgtcttgaagacggctcttttaaacttgtc
ccgaaagaggaagacaaaccttccggcatcgaatgtgagaaatgcggtaaagaacttgtt
ttcaagaaaacacgcttcggcgaagtattagcgtgcccgggctacccggagtgcaaaaat
ataaagaactatgtcacactacctgatggcgagatcaagatcctcgcagccggagaagag
atcggcactccttgccctaaatgtgaggctgggctgactatcaaaggcggaaggaacggc
atgtttatagggtgcaaaaattatcctgactgcgacttcacagcgaacatggaagtcaac
gagcagggggacatcatccctaaatatgataaagttgacgaaaacgttaaatgtgagaaa
tgcggaaaaccgatggttctgaaaaagagccgtcgcggtaagtttttcgcttgtaccggt
tatcccgaatgcaaaaatgctaaatcaacaatagtgcttgaagacggtactatctctgta
aaggaataa
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