Denitrovibrio acetiphilus: Dacet_1348
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Entry
Dacet_1348 CDS
T01189
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dap
Denitrovibrio acetiphilus
Brite
KEGG Orthology (KO) [BR:
dap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dap03016
]
Dacet_1348
Enzymes [BR:
dap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dacet_1348
Transfer RNA biogenesis [BR:
dap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dacet_1348
Prokaryotic type
Dacet_1348
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADD68120
UniProt:
D4H7X1
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All DBs
Position
1392911..1393804
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AA seq
297 aa
AA seq
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MNGVLNIYKEKDMTSFDVVKAVRRITGVKKCGHLGTLDPMAEGVLPVCVGYATKLVDYMM
AADKEYVAQFKLGCSTDSYDSTGNVLEKCEDIKPDYEEVEKVLKSFVGEPELTIPAFSAV
KINGKRAYELARKGEIEDAGKRVMKINDITLMGYEYPEGMFRMSCYKGTYVRSVIHEAGL
ILGTYGVMSGLIRTVSGNFDHKTAYKLGELEELKDKGELAGAFTSVVDATGWGTAVVHRD
AVRLVQNGVSIKRHNYVKLPDGESDMYFMATPEGELLAFAEYAVGDTSPLRIIKLLK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgtattaaatatttacaaagaaaaagacatgacatcctttgatgttgtgaaa
gctgtcaggcgcattacaggcgtgaagaagtgcggtcatctcggcacacttgaccccatg
gcagaaggtgttttacctgtctgtgtgggatacgcaacaaagctcgttgactatatgatg
gctgccgataaagaatacgtagcacagttcaaacttggctgcagtacagacagctatgac
tcaaccggcaatgtgcttgaaaaatgtgaagatataaaaccggactatgaagaggttgag
aaagtgctcaaatctttcgtaggtgagccggagcttactatccctgctttttccgctgtt
aaaattaacggaaagcgagcctatgaactggctagaaagggtgaaatagaagatgccgga
aagcgtgttatgaagataaacgacataacacttatggggtatgaataccctgaagggatg
tttcggatgtcctgctataaagggacttatgtccgcagtgttatccacgaagcggggctg
atactgggaacatatggcgttatgagcggactcataagaactgtcagcggtaattttgat
cataaaaccgcatataagcttggcgagctggaagagctgaaagataaaggtgagcttgcg
ggggcttttacttctgtggtggacgccacagggtgggggacagcggttgttcacagagat
gctgtcaggcttgtacagaatggtgtttcaataaagagacacaattacgttaaacttcct
gatggtgaaagtgatatgtatttcatggcgacacctgaaggggaactgcttgcatttgca
gagtatgctgtcggtgatacatcaccgctaaggataataaaactgctcaaatga
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