Denitrovibrio acetiphilus: Dacet_1753
Help
Entry
Dacet_1753 CDS
T01189
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
dap
Denitrovibrio acetiphilus
Pathway
dap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dap00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dacet_1753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dap03021
]
Dacet_1753
Transcription machinery [BR:
dap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dacet_1753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_ner
Vmethyltransf_C
Motif
Other DBs
NCBI-ProteinID:
ADD68517
UniProt:
D4H0K4
LinkDB
All DBs
Position
complement(1844621..1846501)
Genome browser
AA seq
626 aa
AA seq
DB search
MSMSRKIKSPEVKSIIALGKEKGFLTFDEINENLPDDILSTELIDEIMMLLAQLKIDVID
SKVDKPGLYSADDDDDDEDSISLLKEVEESISTDDPVRLYLKEMGNIALLNREEEIEVAK
EIEEGQRKVVRAVLLYPNTAMKIMDIARNIRNDSMRLKDIIDIDDGSDAENDDLDAVENE
NENEENAAEQPEIKQPEPVKTLEEIAAEVEAEQQLAEEREEQIKVQFIEILEDIADKLHK
NIDLNDKIKENKCSIDEMLNIKFKMHETVDDITDKLLEIKVNYSKICLIANEIKDAHQAI
YDRSKDIDKICKLIRYTDYTDAVSVTEDELTRACENRGMALPDYEIIVKKYKKAKKGLDE
CINSLGFDKAELDVIHDSLLMGENETEKAKSKLIEANLRLVVSIAKKYTNRGLQFLDLIQ
EGNIGLMKAVEKFEYKRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKMMKI
TRQLQQDMGREPTPEEISSKMDIPVEKIKKVMKIAKEPVSLETPIGEDEDSSLGDFIEDK
SAKNPSEEVTYLKLKEHTKQILETLSHREASVLKLRFGIECDSDHTLEEVGKQFNVTRER
IRQIEAKALRKLRHPTRSRILKTFTE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtctcgaaagataaaaagccccgaagttaaaagtatcatcgcactggggaag
gaaaagggcttcctgaccttcgatgagatcaacgaaaacctgccagatgacatcctttca
accgaactgatagacgaaataatgatgctgctggcacagcttaagatagacgtaattgat
tcaaaagttgataagcctggattatattcggctgacgacgatgatgacgacgaagattct
atatcccttctgaaggaagtagaagagtctatcagtacagacgaccctgtcaggctttat
cttaaagaaatgggcaatatagctcttctcaatcgtgaagaagagattgaagttgccaaa
gagatagaggaaggtcagcgtaaggtcgttcgtgccgtactcctttacccgaacacagca
atgaagataatggatattgcgcggaacatacgcaatgacagtatgcgcctgaaagacatc
atcgacattgatgatggctcagatgcggaaaatgatgatctggatgctgtggaaaatgag
aacgaaaacgaggaaaatgcagcagaacagccggagattaaacagccggaacctgttaag
actcttgaagagattgcagcagaggttgaggctgaacaacagcttgcggaagaacgtgag
gaacagataaaagttcagtttattgaaattcttgaagatattgccgacaagctccataaa
aatattgacctgaatgataagataaaagaaaataaatgctccatcgatgaaatgctgaac
ataaagttcaagatgcatgagacagttgatgatatcacagataaacttctggagataaaa
gttaactattctaaaatatgtctgatagctaatgagataaaagacgcacatcaggctatt
tatgaccgttcgaaggatatcgacaaaatttgtaaacttatcagatataccgattatact
gatgcggtgtccgttactgaggacgagctgactagagcctgcgagaacagaggcatggct
ctgcctgactatgaaataattgtcaaaaaatataagaaagcaaagaaagggcttgatgaa
tgcatcaacagtttggggtttgataaagccgaacttgatgttattcacgattctctcctg
atgggggagaacgaaaccgaaaaagctaaatcaaaacttatagaagccaacctccggctt
gttgtatctattgcgaagaaatatacaaacagagggcttcagttccttgatctgatacag
gaagggaacattggtcttatgaaggctgtagagaaatttgagtataaacgcggatacaag
ttctccacatacgccacatggtggataagacaggctattacaagagcaatagcggatcag
gcacgtactatccgtatccctgtccacatgatagagaccatcaataaaatgatgaagata
acaagacagctccagcaggatatgggcagagaacctacgcctgaggagatatcaagtaaa
atggatattcctgtcgaaaagataaagaaagttatgaagatagcaaaagagcctgtttcg
cttgaaacgcctataggtgaagatgaagacagctcccttggtgacttcatagaggataag
tctgctaagaatccgtcagaagaggtaacgtaccttaaactgaaagaacatacaaagcag
atactagagacgctctcacacagagaggcgagcgtacttaaactcagattcggtattgag
tgtgattcagatcatactctggaagaggtagggaaacaattcaatgttacacgtgaacgt
atcagacagattgaggccaaagcacttcggaagctgaggcaccccaccagaagccggatt
ctgaaaacctttacggaataa
DBGET
integrated database retrieval system
