Denitrovibrio acetiphilus: Dacet_2027
Help
Entry
Dacet_2027 CDS
T01189
Name
(GenBank) Domain of unknown function DUF1858
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
dap
Denitrovibrio acetiphilus
Pathway
dap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dacet_2027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dap02000
]
Dacet_2027
Transporters [BR:
dap02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Dacet_2027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
DUF1858
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ADD68790
UniProt:
D4H1N0
LinkDB
All DBs
Position
complement(2134468..2135670)
Genome browser
AA seq
400 aa
AA seq
DB search
MINGNITVLELSENHPEAFNLFVSKGFDNFNKETTLKSAGKFLKLETAIKQKNYDIKTFL
ESLNEIDSNNDAKVDITLRDSKKDGDITVKGLLPCPVRLPLLEGIDAFAESITEKTGLSV
AHDLIAASAGQQWLNDNVVGIRAEDVPDVFVSAGFDVFFDERSFGKHVRNGMFKDMTGDT
HSYFSHMKDPKGNYGMIGVVPAVFLVNKDALDGRAVPKSWADLLSPEFEKSVSLPVGDFD
LFNALLVHIHKMFGEEGVVKLADNMVQSMHPAQMVKNAGRKNEAKPAVTIMPYFFTKMLF
GSKSAEVVWPEEGSIISPIFMLTRADREDVARPVAEFLYGKEVGEILSHRGLFPALNPQV
DNNLPEGAKFNWVGWDYIYKTDMGALLEKLDKVFNDALGA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgataaacggaaatataacagttcttgagctttcagaaaaccacccagaggcgtttaat
ctttttgtcagcaaaggattcgataattttaataaagagactacacttaaatcagcagga
aagtttctgaagcttgaaacagctattaaacagaaaaactatgatataaaaacttttctg
gagagtttgaacgagatagacagcaacaatgatgcaaaggttgatataaccctccgcgat
tcaaagaaagatggtgacatcactgtgaaggggcttctcccctgtccggttcggctgcct
ctccttgaaggcattgacgcttttgcagagagcatcacagagaaaacaggcttgagcgtt
gctcatgaccttatagccgcttctgccggtcagcagtggctgaatgataatgttgtgggc
atcagagctgaggatgtgccggatgtattcgtgtccgccggattcgatgtcttttttgat
gaacgttcttttggtaagcacgttcggaacggtatgtttaaagatatgacaggcgacact
cacagctatttcagccatatgaaagaccctaaagggaactatggaatgataggtgttgtg
cctgcagtatttcttgtaaataaagatgcccttgacgggcgtgcagttccgaagagctgg
gctgatctgctctctcctgagtttgagaagtctgtgtctctccctgtgggcgactttgac
ctttttaacgcacttctggtgcatatacataagatgttcggtgaggaaggggtggttaag
cttgccgataatatggttcagtccatgcaccctgctcagatggtgaaaaatgccggacgt
aagaacgaagcgaagcccgctgttacgataatgccgtacttcttcacaaagatgcttttc
ggcagtaagtccgcagaggtcgtctggcctgaagagggtagtataataagcccgatcttt
atgctgaccagagcagacagagaggatgtggcaagacctgtggcggaattcctttacgga
aaagaagttggcgagatacttagtcacaggggactctttcctgcgttgaatccgcaagtg
gataataacctccctgaaggcgcaaagttcaactgggtagggtgggattacatttataaa
acagacatgggcgcattgcttgagaagcttgataaagttttcaacgatgctctgggggca
taa
DBGET
integrated database retrieval system
