Denitrovibrio acetiphilus: Dacet_2303
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Entry
Dacet_2303 CDS
T01189
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dap
Denitrovibrio acetiphilus
Pathway
dap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dacet_2303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dap03021
]
Dacet_2303
03019 Messenger RNA biogenesis [BR:
dap03019
]
Dacet_2303
Transcription machinery [BR:
dap03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Dacet_2303
Messenger RNA biogenesis [BR:
dap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dacet_2303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
ATPase_2
OB_RNB
NACHT
AAA_22
AAA_25
S1CSD-TOTE-2
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ADD69065
UniProt:
D4H342
LinkDB
All DBs
Position
complement(2433221..2434462)
Genome browser
AA seq
413 aa
AA seq
DB search
MNLTDLKKKPIEELVEIAISTGIENSDGLLKQELIFEILKQTSARNGQIYGQGVIEILPD
GFGFLRSPNYNYLPGPDDIYVSPAQIRKFGLRNGDTVAGEIRPPKDNEKYFALLKVEEVN
FEAASRIRTLFENLTPLFPEERLQLEYKPIAYETRIMNLLAPIGKGQRALIVAPPKTGKT
MLLKSIANAITTNHPEVFLIILLIDERPEEVTDMQRSVDAEVISSTFDEPAYRHVQVAEM
VLNKAKRLVEHKKDVVILLDSITRLARAYNSIEPPSGKVLSGGVDSNALHKPKRFFGAAR
NIEEGGSLSIIASALVDTGSRMDEVIYEEFKGTGNMELHLDRRLVERRTFPAIDINKSGT
RREELLLTKDELNKIWILRRFLSNMNAVDAMEFLLDKMKGTKSNIEFLENMGK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccttactgatttgaaaaagaaacccatcgaagaactggtggaaatagccatttct
acaggcatcgagaactcagacggactccttaaacaagaactaatctttgaaatactcaaa
caaacaagtgcaagaaacggacagatatatggacagggtgtcatagagatacttcctgac
ggattcggattcctccgctctcctaactataactatctgccgggacctgacgatatttat
gtctcaccagctcagatccgtaaattcggtcttagaaacggtgacactgtcgcaggcgag
ataagaccgccgaaagacaatgagaaatacttcgctctcttaaaagtggaagaggtcaat
tttgaggctgcatcaaggatacggactctgtttgaaaacctcacaccgctctttccggag
gagaggctgcagcttgagtacaagccgatagcttacgagacacgtattatgaacctgctt
gctcctatcggtaaagggcagagggcacttatcgtggctcccccgaaaacaggtaaaaca
atgcttctgaaaagcattgcaaacgccatcaccaccaaccatccggaagttttcctcatt
atcctgcttatagacgaaagaccagaagaagttactgacatgcagcgttctgttgacgct
gaggttatcagttcaacatttgacgaaccggcttacaggcacgttcaagttgcagaaatg
gttctgaataaagcgaaaaggcttgttgaacataagaaagacgtggttattctgctcgac
tctataacaagacttgcgagagcatacaactccattgaaccgccgtcaggtaaagtcctt
tccggtggtgtggattccaacgctctgcacaagccaaaaagattttttggtgcagccaga
aatatagaagaaggcggttcactctcaatcattgcatctgctctggttgacactggttcc
agaatggacgaagttatctatgaagagttcaaaggaactggcaacatggagcttcacctc
gacagaagacttgttgagcgcagaacattccctgctattgatatcaacaaatcaggcaca
agacgggaagaactgcttcttacaaaagatgagcttaacaagatatggatactccgccgc
ttcctgtcaaacatgaatgctgtggacgctatggaatttctccttgataagatgaaaggg
acaaaatccaatattgagtttctggaaaacatggggaaataa
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