Denitrovibrio acetiphilus: Dacet_2406
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Entry
Dacet_2406 CDS
T01189
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dap
Denitrovibrio acetiphilus
Brite
KEGG Orthology (KO) [BR:
dap00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dap01011
]
Dacet_2406
Enzymes [BR:
dap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Dacet_2406
Peptidoglycan biosynthesis and degradation proteins [BR:
dap01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Dacet_2406
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM3_NFP
HTH_38
LPAM_1
DUF6470
SLT_2
Motif
Other DBs
NCBI-ProteinID:
ADD69168
UniProt:
D4H3R6
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All DBs
Position
2540201..2541952
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AA seq
583 aa
AA seq
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MKNILIYILLAVSLAACQTEIKGPEEAMIPSVPEDSFTFSPFAHPEFKQKLDKTFDIYTV
VNTSHEFRFGPHDTEYGKYDVIALVENSRFDYYVRLFTGNYRKVFQKWLDRSNEYVYILR
DILRREGVPEELVYLPFTESGFNPAIRSRAGACGMWQFMKGTGKAYGLDTDFWVDERNDF
EKSTVAAARHLKDLYESLGDWYLAMAAYNAGLGKVLNAIKRYNTRDYFVMSQRKYRYLKL
ETKDYVPKYMALRYLARNYQEYGFDTPNGQPQLFDRVTLYRQANLYVLAKIIGSDIDTLR
ELNPELMTPMTPPVEEYSMRIPYGKKKILEEKLEHISDAELAQFHIEFARKGHSIASYAK
KYGMTASALKDINGLRHNMILRDTYLFIPIKNAYDEELNRMFVQELKRYNPKVHIVRSGD
NMYQIAHKYGMSLYELMAMNRDVNPKRIRPGQSIIVSDSYYNTRTNKKSVRTYASKTKSG
SYAKITHKVSYGESLWSIANQYGTTISQIKSSNKLRSNVIQPGKDLIVYNYNSSAADDGK
YTVRRGDSLWEIARKFNTSVNTIKRKNNLRGNNIHPGSVLVVD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatattgatatatatactactggcagtgtcgctggcagcgtgccaaacggag
ataaaaggtcccgaagaggcgatgataccatcggttcccgaagactctttcacattctca
ccttttgctcacccagaattcaaacaaaaacttgataaaacatttgatatttacaccgtg
gttaacacaagccatgagttccgtttcggaccccacgatacagaatacggtaaatatgac
gttatagctcttgttgaaaacagtcgttttgactattacgtaaggctttttaccggtaac
tatagaaaagtttttcagaaatggctggatagatcaaatgagtatgtatatatcctgcgt
gatatactccgccgcgaaggtgtaccggaagagcttgtgtatctccccttcactgaaagc
ggtttcaaccctgcaataagatccagagccggagcatgcggaatgtggcagttcatgaaa
ggaaccggaaaagcctatggtctggacactgatttctgggttgacgaacgcaatgacttt
gaaaaatccactgttgccgcagccagacacctgaaggacctctatgagtctctgggtgac
tggtatctcgccatggcagcctacaacgcagggctaggtaaggtgctgaacgccataaaa
cgctacaatacaagggactactttgtcatgagtcagcggaaataccgctaccttaaactc
gaaacgaaagactatgtaccaaaatatatggctctcagatatctggcaagaaactatcag
gaatacggttttgacacgccgaacggacagcctcagcttttcgaccgagtaaccctttat
cgtcaggcaaacctttacgttctcgcaaagataataggctctgacatagataccctcagg
gagctgaatcccgaactgatgactcccatgactccgcctgtggaagagtattcaatgcgt
atcccatacggcaaaaagaagattcttgaagaaaaactggaacacatctctgacgccgaa
cttgcacaattccatatagaattcgcacgtaaaggtcacagcatagcatcttatgcaaaa
aaatacggaatgaccgcaagtgcactgaaagacataaacggtctcagacataacatgata
cttcgcgatacttatctcttcatccctatcaagaacgcatatgacgaagagctgaacaga
atgtttgttcaggaattgaaaagatataacccgaaagtccatatagtcagaagcggcgac
aacatgtatcagatagctcataaatacggaatgtcactctacgaactaatggcaatgaac
agagatgtcaaccctaaacgtatacgccccggacagtcgatcatcgtatctgactcttac
tataacacgaggacaaacaaaaaatccgtacgcacctatgccagcaaaacaaaatcaggc
tcatacgcaaaaataacacataaagtcagctacggtgaaagcctctggagcatcgccaat
caatacggcactacgatatctcagataaaatccagcaataaactacgcagtaacgttatt
cagcccggcaaagaccttattgtctacaactacaactcttctgccgctgacgatgggaaa
tacaccgtacgcagaggggacagcctctgggaaatcgccagaaaattcaacaccagcgtt
aacaccataaaacgtaaaaataacctgagaggaaacaatatacatccagggtcggtgctc
gtagtagattaa
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