KEGG   Denitrovibrio acetiphilus: Dacet_2560
Entry
Dacet_2560        CDS       T01189                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dap  Denitrovibrio acetiphilus
Brite
KEGG Orthology (KO) [BR:dap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dap02048]
    Dacet_2560
Enzymes [BR:dap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Dacet_2560
Prokaryotic defense system [BR:dap02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Dacet_2560
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII HSDR_N_2 Helicase_C Peptidase_M73 Protoglobin His_Phos_1
Other DBs
NCBI-ProteinID: ADD69319
UniProt: D4H4J0
LinkDB
Position
2717489..2720575
AA seq 1028 aa
MTKLIEDTLEYVLIDLFKELGYDYAFAPDFTMVDDDGGDYERISTDEVILTKRLKRKLME
INPEVGEEQIDEAIKKLSNPESVKLIDNNRAFHKYVTDGISIPYHEDGETKTAIINLFDF
KDISNNDWLVANQFTVTEAKEKRRPDVIVFVNGLPLAVIELKNPSDEKATMFDAFTQLQN
YKNFIPNLFNYNEILIASDGYSATAGSLTADWERFMPWKTVNGEKDPKGMIQLEVLIRGM
FDKERFLDIIRNFIVFEVSDDKIIKKMAGYHQYHAVNKALSRTVEATSEKGDKRIGVVWH
TQGSGKSLSMVFYSGKVVQKLELSNPTLVVLTDRNDLDEQLFGNFSLCSDLLRQKPVQAT
SRAHLRELLNVASGGIVFTTIQKFFPKEDEDSHPELSPRRNIIVMADEAHRSQYDFIDGF
ARHMRDALPGAAFIGFTGTPIETSDKVTTSVFGSYIDIYDMEDAVNDGATVRIYYEARLA
KIDFDEVEKPKVDPEFEQVTEDQEKFEKQKLQAKWTALEALVGATSRLELVAKDIVEHFE
DRLSAMDGKAMVVCMSRRICVELYNEIAKLRPDWHDEDDKQGFIKIIMSGSASDKEEWQP
HIRTKQQREELANRFKKPDTDFKLVIVRDMWLTGFDAPCMHTMYVDKPMGGHNLMQAIAR
VNRVFKDKPGGLVVDYIGIADDLKNAMRNYTASGGKGKSHHDKDEAAAYMMEKFEQVIDL
MHDFDYEAILHSKEKERLDGIYEAMEYVLSIDRKMDFIKMVTELSRAFALAVPAPQTVEV
RDYLALFQEIKAAIIKNTITPEKKSPDELNTALKQLVSKAVTANGVVDVFGAAGLDKPEI
SILSDEFLAEVKEYPYKNLAVEMLAKLLADEIKIKLKRNVVKSRSFIERLEESMKNYQNR
SIEAAMVIQHLIDLAKEMRKEAERGNDLGLSDDEIAFYDALLTENAAFGERLLKEMGDEL
KVVAVELVQAVKKNVTIDWTKRDAVKAKLRVIVKRILRKYGYPPEASDKATQTVLEQAAA
LCEEWAEC
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgactaaactcatcgaagacacactcgaatacgttttaatagacctttttaaagagctg
gggtatgactacgcctttgctcctgactttaccatggtggatgatgacggcggcgattat
gaacgcatcagcacggacgaggttattctcaccaagcggttgaaacgcaagctgatggag
attaacccagaggtaggcgaagagcagattgatgaagcaatcaaaaagcttagtaacccg
gagagcgtgaagctcatcgacaataaccgagcgtttcataaatacgtcacagacggaatc
agcattccataccacgaagacggcgagacaaagacagcaataatcaatcttttcgacttt
aaagacattagtaacaatgactggctggtggcgaaccagttcaccgttaccgaggcaaaa
gagaagcgcagaccagacgttatagtcttcgtaaacggtttaccgctggcagtaatcgag
ctgaaaaatccatctgatgaaaaggcaactatgttcgatgccttcactcagcttcaaaac
tataaaaatttcatcccgaacctgtttaactataacgaaatccttattgcctccgacggc
tacagtgcaacggcaggctcacttactgccgactgggaacgcttcatgccgtggaagacc
gtgaacggcgaaaaagacccaaaaggcatgattcagctggaagtgctcatcagaggcatg
tttgacaaagagcgttttctggacatcatccgaaacttcatcgttttcgaagtgagtgac
gacaaaatcatcaaaaagatggctggctaccatcagtaccacgcagtgaacaaagcactc
agcagaacagttgaagctacctccgaaaaaggggacaaacgaataggcgttgtgtggcac
actcaaggaagcggaaagagcctctctatggtattttattctggtaaagttgtgcaaaag
ctggagctaagcaacccgacattggttgtacttacagacaggaacgaccttgacgaacag
ctattcggcaatttctcactatgcagtgacctgctccgtcagaaacctgtgcaggcaaca
agcagagcacacctgcgggaactgctaaatgtggcatccggcggaatagtgtttaccacg
atacagaagtttttcccgaaagaagacgaagacagccacccagagctgagcccacgcaga
aacatcatcgttatggcagacgaggcacacagaagccagtatgacttcatagacggcttt
gctcggcacatgcgggatgctctccccggtgcggcgttcatcggctttaccggaacgcca
atcgaaacatcagacaaagttactacttccgtattcggctcatatattgacatatacgac
atggaagatgctgtaaatgacggggcaaccgtccgcatctattacgaagcacgtcttgcg
aaaatcgactttgacgaggttgaaaaaccgaaagtagacccagagtttgagcaagtaaca
gaagaccaagaaaagttcgaaaaacagaagctacaggcaaaatggacagcattagaagct
cttgtaggggcgaccagcaggctggagcttgtagcgaaagacatagtagagcatttcgaa
gaccgactctctgctatggacggaaaagctatggttgtgtgtatgagccgccgcatatgt
gttgagctttacaatgaaatagcaaagctacgcccagactggcatgacgaagacgacaag
caaggcttcataaaaatcataatgtccggctcagcatctgacaaggaagaatggcaaccg
cacatacgcaccaaacagcagagagaagagctggcaaacaggttcaaaaagcccgacaca
gacttcaagctggtaatagttcgtgacatgtggctgacagggtttgacgcaccatgtatg
catacgatgtatgtagacaaacctatgggcgggcataaccttatgcaggcaatcgctcgt
gttaacagggttttcaaagacaagcccggtggactggtggtggactacatcggcattgca
gacgacctgaaaaacgctatgcgtaattacaccgctagtggcggtaaaggaaagtctcac
cacgacaaagacgaagccgccgcatatatgatggagaagttcgagcaggtcatcgacctt
atgcacgactttgactatgaggcaatccttcactccaaagaaaaagaacgattggacggc
atttatgaagctatggaatatgttctctccatagaccgcaaaatggactttataaagatg
gtgacagagctttcacgtgcttttgcactggctgtccctgcaccccagacggtggaagtc
agagactatttagccctgtttcaagaaattaaagcggcaatcataaagaacaccattacc
ccagagaaaaagtcgccagatgagctgaatacggctcttaaacagcttgtttcaaaagcg
gttacggcgaatggcgttgtagatgtttttggtgcagcaggcttggacaaaccagaaatc
tccattctctcagatgaatttttggcagaggtgaaagaatacccatacaagaaccttgcc
gttgagatgctggcaaagctgttggctgatgaaataaagattaagctgaaacggaatgtg
gtgaaatcccgctcatttatagaaagactcgaagaatcgatgaagaattaccagaaccgc
tctattgaggcggcaatggttattcagcatcttatagaccttgcaaaagagatgcgaaaa
gaagcagagcgaggcaacgaccttgggctgagtgatgatgaaatcgctttttacgatgca
cttctgacagaaaatgccgcttttggcgagaggctcttaaaagagatgggggacgagctg
aaagttgtcgctgttgagcttgtgcaagcagttaagaagaacgtaaccatagactggact
aaaagagacgctgtgaaagccaagctgagagtaatcgttaaacgtatactccgcaaatac
ggctacccgccagaagcaagcgacaaagccacccagacagttctggaacaagcagccgcc
ctttgtgaagaatgggcagagtgttag

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