KEGG   Denitrovibrio acetiphilus: Dacet_2757
Entry
Dacet_2757        CDS       T01189                                 
Name
(GenBank) beta-lactamase domain protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
dap  Denitrovibrio acetiphilus
Pathway
dap03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dap00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dacet_2757
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dap03019]
    Dacet_2757
Messenger RNA biogenesis [BR:dap03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Dacet_2757
SSDB
Motif
Pfam: RNase_J_b_CASP RMMBL Lactamase_B RNase_J_C Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: ADD69511
UniProt: D4H5S0
LinkDB
Position
complement(2934962..2936602)
AA seq 546 aa
MSCSISFLGGVGEIGMNMYVYETEETAIIVDCGVMFADNNFPGIDYVIPDFEYLDKIKHK
LKALFITHGHEDHVGAVPFLLRSFNMPVYGGKLSLGILEQKRGAKKVSPDLRSISPRQVV
KAGDFTVKFLPVTHSISDTYALYIKCGDFSALHCSDYKIDQSPAGGEPFNPSDFTALAKE
GLTALLVDSTNATSEGFTQSESSIKDDLKKIFRNAKGRIFFTSFSSNIDRFRQILDIARE
VGRKVVLEGTALDRNISIAKSLGYIDLPDDLIVGLRASKKLPDDEICYIITGCQGETNST
LYRIASGERKDLHVREGDLFVISARVIPGNEKNLINLVNFIYKAGGNVVDIGKNRIHVSG
HASQEEIKLMVNFTRPKYVIPVHGEPVHMITLKRILKGMGLVAPENVVLVEDGQKAVFEN
EELAKLDDVPHGKVFIDLRGHFVMDEDSVRDRKHLCRDGAVSIVAIRRKSDGTYIFPLTV
ETAGFELEPEQMTGLQDFLLENLGELVNDDDYDFTDIKGGLSRLTRRFFKKNLDRRPLVI
PVVTEI
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgtcttgttctatatcatttttaggcggtgtcggcgagataggcatgaacatgtatgtc
tacgagaccgaagaaactgccattatcgttgattgcggagttatgttcgcggataacaac
tttccggggattgactatgtcatacccgattttgagtatctggacaaaattaagcataag
ctgaaagcactgttcatcacccatggtcatgaagaccacgtaggtgctgttccctttctg
ctccgcagttttaacatgcctgtctacggcgggaagctctctctggggattctggaacag
aaacgcggcgcgaaaaaggtctcaccagacctgcgcagcatatccccgagacaagtggtt
aaagcgggggacttcactgttaagtttctccctgtaacacactcgataagcgacacctac
gcactgtatattaagtgcggcgatttcagtgcactgcactgctctgactacaagatagac
cagtcacctgccggaggggaacccttcaacccgtcagattttactgcactggcaaaagag
gggctgacagctcttctggtggattccaccaatgccaccagcgaaggctttacacagtca
gaatccagcattaaggacgacctgaaaaagattttccgcaatgcgaaaggacgtatattc
tttaccagtttttcgtccaatatcgaccgtttccgacagatactggacatagccagagag
gttgggcgtaaggtcgttctggaaggtacagctctggacagaaatatctccatagcgaaa
tcgctgggatatatagacctccctgatgatcttatagtggggcttcgtgcgtctaaaaaa
ctgcctgacgacgagatatgctatataatcacgggctgccagggggagacaaactccacc
ctttaccgcatcgcctccggtgaacgtaaagacctgcatgtcagagagggggatcttttc
gtgatctctgcaagggttatcccggggaatgaaaagaaccttatcaaccttgttaatttc
atatataaagctggtgggaatgtcgtagatatcggcaaaaaccgcattcatgtttccgga
cacgcctctcaggaagagataaagctgatggtgaacttcaccagacctaaatatgtcatc
cctgtgcatggtgaacccgtgcatatgataacattaaagcgcattctgaaaggtatgggg
cttgtcgctcctgaaaatgttgttctggtggaagacggtcagaaagctgtctttgaaaac
gaagaactcgcgaaactggatgatgttcctcacggaaaggtctttatcgacctgcgtgga
cattttgtcatggatgaggattctgtacgggacagaaagcatctctgccgtgacggtgcg
gtttctatcgttgccatcaggcggaagtcagacggcacatacatctttcctctgactgtt
gagacagcaggtttcgagcttgagccggaacagatgacgggattacaggattttctgctt
gaaaaccttggtgaactcgtaaacgatgatgattatgattttacagatataaagggcggt
ctctcaaggctgacccgcagattttttaagaagaatctcgacaggcgtcctcttgtgata
cctgttgtgacggagatataa

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