Denitrovibrio acetiphilus: Dacet_2757
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Entry
Dacet_2757 CDS
T01189
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
dap
Denitrovibrio acetiphilus
Pathway
dap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dacet_2757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dap03019
]
Dacet_2757
Messenger RNA biogenesis [BR:
dap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Dacet_2757
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B
RNase_J_C
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ADD69511
UniProt:
D4H5S0
LinkDB
All DBs
Position
complement(2934962..2936602)
Genome browser
AA seq
546 aa
AA seq
DB search
MSCSISFLGGVGEIGMNMYVYETEETAIIVDCGVMFADNNFPGIDYVIPDFEYLDKIKHK
LKALFITHGHEDHVGAVPFLLRSFNMPVYGGKLSLGILEQKRGAKKVSPDLRSISPRQVV
KAGDFTVKFLPVTHSISDTYALYIKCGDFSALHCSDYKIDQSPAGGEPFNPSDFTALAKE
GLTALLVDSTNATSEGFTQSESSIKDDLKKIFRNAKGRIFFTSFSSNIDRFRQILDIARE
VGRKVVLEGTALDRNISIAKSLGYIDLPDDLIVGLRASKKLPDDEICYIITGCQGETNST
LYRIASGERKDLHVREGDLFVISARVIPGNEKNLINLVNFIYKAGGNVVDIGKNRIHVSG
HASQEEIKLMVNFTRPKYVIPVHGEPVHMITLKRILKGMGLVAPENVVLVEDGQKAVFEN
EELAKLDDVPHGKVFIDLRGHFVMDEDSVRDRKHLCRDGAVSIVAIRRKSDGTYIFPLTV
ETAGFELEPEQMTGLQDFLLENLGELVNDDDYDFTDIKGGLSRLTRRFFKKNLDRRPLVI
PVVTEI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgttctatatcatttttaggcggtgtcggcgagataggcatgaacatgtatgtc
tacgagaccgaagaaactgccattatcgttgattgcggagttatgttcgcggataacaac
tttccggggattgactatgtcatacccgattttgagtatctggacaaaattaagcataag
ctgaaagcactgttcatcacccatggtcatgaagaccacgtaggtgctgttccctttctg
ctccgcagttttaacatgcctgtctacggcgggaagctctctctggggattctggaacag
aaacgcggcgcgaaaaaggtctcaccagacctgcgcagcatatccccgagacaagtggtt
aaagcgggggacttcactgttaagtttctccctgtaacacactcgataagcgacacctac
gcactgtatattaagtgcggcgatttcagtgcactgcactgctctgactacaagatagac
cagtcacctgccggaggggaacccttcaacccgtcagattttactgcactggcaaaagag
gggctgacagctcttctggtggattccaccaatgccaccagcgaaggctttacacagtca
gaatccagcattaaggacgacctgaaaaagattttccgcaatgcgaaaggacgtatattc
tttaccagtttttcgtccaatatcgaccgtttccgacagatactggacatagccagagag
gttgggcgtaaggtcgttctggaaggtacagctctggacagaaatatctccatagcgaaa
tcgctgggatatatagacctccctgatgatcttatagtggggcttcgtgcgtctaaaaaa
ctgcctgacgacgagatatgctatataatcacgggctgccagggggagacaaactccacc
ctttaccgcatcgcctccggtgaacgtaaagacctgcatgtcagagagggggatcttttc
gtgatctctgcaagggttatcccggggaatgaaaagaaccttatcaaccttgttaatttc
atatataaagctggtgggaatgtcgtagatatcggcaaaaaccgcattcatgtttccgga
cacgcctctcaggaagagataaagctgatggtgaacttcaccagacctaaatatgtcatc
cctgtgcatggtgaacccgtgcatatgataacattaaagcgcattctgaaaggtatgggg
cttgtcgctcctgaaaatgttgttctggtggaagacggtcagaaagctgtctttgaaaac
gaagaactcgcgaaactggatgatgttcctcacggaaaggtctttatcgacctgcgtgga
cattttgtcatggatgaggattctgtacgggacagaaagcatctctgccgtgacggtgcg
gtttctatcgttgccatcaggcggaagtcagacggcacatacatctttcctctgactgtt
gagacagcaggtttcgagcttgagccggaacagatgacgggattacaggattttctgctt
gaaaaccttggtgaactcgtaaacgatgatgattatgattttacagatataaagggcggt
ctctcaaggctgacccgcagattttttaagaagaatctcgacaggcgtcctcttgtgata
cctgttgtgacggagatataa
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