Denitrovibrio acetiphilus: Dacet_2872
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Entry
Dacet_2872 CDS
T01189
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dap
Denitrovibrio acetiphilus
Brite
KEGG Orthology (KO) [BR:
dap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dap03032
]
Dacet_2872
03400 DNA repair and recombination proteins [BR:
dap03400
]
Dacet_2872
Enzymes [BR:
dap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Dacet_2872
DNA replication proteins [BR:
dap03032
]
Prokaryotic type
DNA Topoisomerases
Dacet_2872
DNA repair and recombination proteins [BR:
dap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dacet_2872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADD69622
UniProt:
D4H6E8
LinkDB
All DBs
Position
3060355..3062841
Genome browser
AA seq
828 aa
AA seq
DB search
MSDTSKTIDISIEESVKNSYLDYAMSVIIGRALPDVRDGLKPVHRRALFSMSEMGVHYNK
AYKKSARIVGDVIGKFHPHGDSAVYDTIVRMAQDFSLRYPLVDGQGNFGSVDGDSAAAMR
YTEIRLSKISDDLLADLDKDTVDFSENYDGTMVEPTVLPTRIPALLVNGTSGIAVGMATN
IPPHNITEIISALNYMIDEPGYDTEGILRHVSGPDFPTAGIIMGSKDIQTAYRTGRGSIT
IRARVLIEETKTGKPVIIVREIPYLVNKASMIEKIADLVQEKKITGITDLRDESDKDGIR
VVIELKKGENVDVVLNRLYKFTQLQTSFGFNMVAIVDGKPQTLSLREILEEFLKHRVTVV
TRRTQFLLRKAEARLHILEGLIKAVENIDEVIKTIKASKDTPAAKANLCAQFGFTEIQAQ
SILEMRLQKLTGLEIEKLKEEYENILKDIEYYKSILGNRSVMMSVIKDELQDVLDKYGDD
RRTEIAPGLTEFEDEDLIPNNEKVVTMTHNGYIKATLLSSYVAQKRGGKGKTGAGSKDED
FVERLIVTTNHTRLMFFTNTGKVHYLKVYALPEAQRDAKGRHISNLLTLEPEEFVASVLA
LPAETDGKYLFFATKSGTIKKTSLEEFKSGRSGIVAIKLRDGDEILTADITTDEDTVILS
TKAGKTIQFSSTDARPMGRSTSGVRGITLEARDELMSMEVLTGAPYILSVTSAGYGKRTP
VDEYRVQTRGGKGLKLCRVSPKTGFVVGAKQVTDNDDVMIITRSAKTIRTEVQGISKMGR
DTMGVKLMDTGDDDIIAFAVIKEGTIHEDSDNNEREGTGSEGQGGTED
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacaagtaaaacaattgatattagtatagaagaatctgtcaagaatagttat
cttgactacgcaatgtccgttattatcggacgtgcgctccctgatgtccgtgacggtctg
aaacctgttcacagacgtgcactcttttctatgagcgagatgggagtacattataacaaa
gcatataagaaatccgcacgtatagtcggtgacgttataggtaagtttcacccgcatggt
gattctgctgtttacgataccatcgtacgtatggcgcaggatttctctctgaggtatcct
cttgtggatggtcagggtaactttggttctgttgacggcgactctgctgctgccatgagg
tacacagagatcagactttcaaagatttctgatgatctcctcgcagaccttgataaagat
actgtggatttctctgaaaactatgacggcactatggttgaacctactgttctgcctacc
agaattccagcccttcttgtaaatggtaccagcggtattgctgttggtatggcaaccaat
atccctccgcataacattacagagataatcagtgctcttaattatatgattgacgagccg
ggatacgacactgaaggtatcctccgtcacgtttcaggtcctgacttccccactgccggt
attatcatgggcagcaaagatattcagaccgcatacaggacagggcggggctctattaca
ataagagccagagtccttatagaagagactaaaacaggcaagcctgtaattatcgttcgt
gagataccttatcttgtgaataaggcttcaatgatcgaaaagatcgctgaccttgttcag
gagaagaagataacaggtatcacagaccttagagatgaatccgataaagacggcataagg
gtagttatcgagcttaaaaaaggtgaaaatgtcgatgtggtgctcaatagactttataaa
ttcacccagttgcagacatctttcggttttaatatggtcgctattgttgacggtaaacca
caaacactctctctcagagaaatacttgaagagttcctgaaacacagagtgaccgttgta
acgagaagaacgcaatttcttcttagaaaggctgaggcaaggcttcatattttagaaggt
cttatcaaagctgttgaaaacatcgacgaagtaattaaaacaatcaaagcttctaaagat
actcctgctgctaaggcaaacctttgtgctcaattcggttttacagaaattcaggctcag
tcaatccttgaaatgagacttcagaagctcacaggtctggaaattgaaaaacttaaagaa
gagtacgaaaacattcttaaagacatagaatattataaaagcatccttgggaaccgttct
gtaatgatgtctgtcataaaagatgagcttcaggatgtacttgataaatacggtgacgac
agaagaactgagatagctcccgggcttactgagttcgaagacgaagacctgattcctaat
aatgaaaaagtagtgacaatgacccataatggttatataaaagctactcttctttcaagc
tatgtcgcacagaagcggggcggtaaaggtaagaccggcgctggcagcaaggatgaggac
tttgtagaacgtctgatagtgactacaaaccacacaaggctgatgttctttaccaacaca
ggtaaagtacactatcttaaggtttatgcactgccggaggcgcagagagacgcaaaaggg
agacacatatctaacctgctcactctggaaccggaagaattcgtagcttcagtgcttgct
ctgccggctgaaacagatggtaaatacctctttttcgctactaaatccggtactattaaa
aagactagccttgaggaattcaaaagcggacgaagcggcatagtagcaattaaacttcgt
gacggtgatgaaattctcacagcagatatcactaccgacgaagacactgtgattctctcc
actaaagcaggtaagacaattcagttttcttcaacagatgccagaccaatgggcagaagt
acaagcggtgtgagagggattacactagaggctagagatgaactgatgagtatggaggtt
cttaccggagctccttatattctttctgtcacatcagcaggttacggaaaacgtacccct
gttgacgagtacagggttcagacaagaggcggtaagggattgaaactttgccgtgtcagc
cctaaaactggctttgtggtcggagccaagcaggtaactgacaatgacgacgtgatgatt
atcacaaggtctgctaaaacaatcagaacagaggttcagggtatctcaaaaatgggcagg
gacacaatgggtgttaagcttatggataccggagatgacgatattatagcatttgcagta
ataaaagaggggacaattcatgaagacagcgacaataatgaacgggaaggcactggcagc
gaaggtcagggcgggactgaagactaa
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