Dickeya aquatica: DAQ1742_00230
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Entry
DAQ1742_00230 CDS
T06021
Symbol
rfaC
Name
(GenBank) ADP-heptose:LPS heptosyl transferase I
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
daq
Dickeya aquatica
Pathway
daq00540
Lipopolysaccharide biosynthesis
daq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DAQ1742_00230 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
daq01005
]
DAQ1742_00230 (rfaC)
Enzymes [BR:
daq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
DAQ1742_00230 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
daq01005
]
Core region
DAQ1742_00230 (rfaC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_9
Epimerase_2
UPF0181
DUF3071
Motif
Other DBs
NCBI-ProteinID:
SLM61355
UniProt:
A0A375A5N9
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All DBs
Position
complement(233385..234356)
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AA seq
323 aa
AA seq
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MRVLIVKTSSMGDVLHTLPALTDAMQVIHGIEFDWVVEEGFAQIPGWHPAVDRVIPVAIR
RWRKNWFSAPVRAERAAFKQRLREKRYDAVIDAQGLLKSALLVTRLAHGNKHGLDWKSAR
EPLASWFYQYRHPVARQQHAVERIRALFAMSLNYRKPAEQGDYAIAARFLSTSVADTSPY
LVFLHATTRDEKHWPETHWRELIALTAPTGLRILLPWGAEHEHQRAQRLAEGFAHVEVLP
KLTLEQVAAVLAGAQVVVSVDTGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQTAVISC
NNKMDSISAENVFRQLTENDIKR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgctgattgttaaaacctcatccatgggcgatgtgctgcacaccctaccggca
ttgaccgatgcaatgcaggtgattcatggcattgaatttgactgggtagtggaagagggc
tttgcccagatacccggctggcatccggcagttgaccgcgtcattcccgtcgccattcgc
cgctggcgtaaaaactggtttagtgcgccggttcgtgctgaacgcgcggcgtttaaacag
cgcctgcgggaaaagcgctatgacgcagtcatagacgcgcagggattactgaaaagcgcc
ttgctggtgacacgactggcccatggcaacaagcacggccttgactggaaaagtgcgcgt
gaaccgctggcaagctggttctatcaataccgccacccggtcgcgcgccagcaacatgcc
gtagagcgtattcgcgcgctgtttgccatgagtctcaattaccgcaaaccggcagagcaa
ggcgactatgcgattgccgcacgctttctctcaacgtcggttgccgatacatcaccctat
ctggtgttcctgcacgcgaccacgcgtgatgaaaaacactggccggaaacccactggcgt
gaactgatagccctgacagcgccaaccgggctgcgtattctgctgccctggggagcagaa
catgaacatcaacgggcacagcgtcttgccgaaggctttgcgcatgtcgaggtgctgcca
aagctcacgctggagcaggttgccgccgtgctggcgggcgcgcaggtcgtggtatcggtg
gataccggtttaagtcacctgacggcggcacttgataggcccaatatcaccttatatggc
ccgaccgaccctggactgattggcggctacgggaaaaaccaaacggcggtgatatcttgt
aacaataagatggacagtatttccgccgaaaatgtattcaggcagctcacagagaatgat
ataaaacgctaa
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