| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase beta subunit
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:daq00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DAQ1742_00291 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:daq03021]
DAQ1742_00291 (rpoB)
03400 DNA repair and recombination proteins [BR:daq03400]
DAQ1742_00291 (rpoB)
Enzymes [BR:daq01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DAQ1742_00291 (rpoB)
Transcription machinery [BR:daq03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DAQ1742_00291 (rpoB)
DNA repair and recombination proteins [BR:daq03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DAQ1742_00291 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
294157..298185
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| AA seq |
1342 aa
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIS
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTFSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFDKVVYEIHNNKLQME
LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDGIERIEVPVEYIAGKVLAKD
YVDQSTGEVIAMANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYMSETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAETLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGIL
SKEDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGVVT
DEIHYLSAIEEGNYVIAQANTNLDDEGHFIDELVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEAEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
TEELQILEAGLFARIHDVLVAGGVEAEKLDKLPRERWLELGLTDEDKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQHQEVAK
LREFIQRAYDLGNDVRQKVDLNTFSDEEVLRLAENLKKGMPIATPVFDGAKENEIKALLK
LGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMP
ESFNVLLKEIRSLGINIELEEE |
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| NT seq |
4029 nt +upstreamnt +downstreamnt
atggtttactcctataccgagaaaaaacgcattcgtaaggattttggtaaacgtccacaa
gtgttggatataccttatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatccggaaggtcagtatggtctggaagccgcattccgttccgtattccctatctca
agttacagcggcaattccgaattgcagtatgtgagctaccgcctgggtgagccggtattt
gacgtgaaagagtgtcaaattcgtggtgtcaccttctctgctccgctgcgtgtgaagctg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgttaaagacattaaagaacaa
gaagtgtacatgggcgaaatcccgctcatgaccgacaacggtacctttgtcatcaacggt
actgagcgcgtgatcgtttctcagttgcaccgtagcccaggtgtgttcttcgatagcgac
aagggtaaaacccactcttccggtaaggtgctgtataacgcacgtattattccttaccgt
ggttcctggctggatttcgagtttgacccgaaagataacctgtttgttcgtatcgaccgc
cgccgcaagctgcctgcgaccatcattctgcgtgcgttgaattacaccactgaacagatt
ctggatctgttcttcgataaagtggtgtatgagattcacaacaacaaattgcagatggag
ctggtgcctgagcgcctgcgtggtgaaaccgcctctttcgatatcgaagccgacggcaaa
gtctacgttgagaaaggccgccgcatcacggcgcgtcatattcgtcaactggaaaaagac
ggtatcgaacgtattgaagtgccggtcgaatacatcgctggtaaagtgctggcgaaagac
tatgtggatcaaagcacaggtgaagtgatcgcgatggcgaacatggagctgtcgctggat
ctgctggccaagttgagccaatccggtcacaaacgcattgaaaccctgttcactaacgat
cttgatcacggtccgtacatgtctgaaacagtacgtgtcgacccgactaacgatcgcctg
agtgctctggttgaaatttaccgcatgatgcgtcctggtgaaccgccgacacgcgaagcg
gctgaaacgctgtttgaaaacctgttcttctctgaagatcgttacgatctgtctgcggtt
ggccgtatgaagttcaaccgttccctgctgcgcgaagagattgaaggctccggcattctc
agcaaagaagacattatcgatgtgatgaaaaaactcatcgatatccgtaacggtaagggc
gaagtcgatgatatcgaccacctgggcaaccgtcgtatccgctctgtgggcgagatggcg
gaaaatcagttccgcgtcggtctggtgcgtgttgagcgtgcggtgaaagaacgtctgtca
ctgggcgatctcgatacgctgatgccgcaggacatgatcaacgctaaaccgatttccgca
gcagtaaaagagttcttcggttccagccagctgtctcagtttatggaccagaacaacccg
ctgtccgagattacgcacaaacgccgtatctccgcattgggcccaggcggcttgacccgt
gagcgcgctggctttgaagtgcgagacgttcacccgactcactacggtcgtgtatgtcct
atcgaaacgcctgaaggtccgaacatcggtctgattaactcgctgtccgtgtacgcgcag
accaacgagtacggtttcctggaaaccccgtatcgccgtgtacgcgatggcgtggtgact
gacgaaattcattacctgtcagcgattgaagaaggcaactacgttattgctcaggcgaac
accaacctggatgacgaaggccacttcattgacgaactggtgacttgccgtagcaagggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtttccacccagcaggtg
gtttccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgcgccctg
atgggtgcgaacatgcaacgtcaggctgtaccaacgctgcgtgcggacaagccgctggtc
ggcaccggtatggagcgtgcggttgccgttgactccggtgtaaccgcagttgctaaacgc
ggcggtaccgtgcagtacgttgatgcctctcgtatcgttatcaaagttaacgaagccgag
atgtatccgggcgaagccggtatcgacatttacaacctgaccaaatacacccgttccaac
cagaacacctgtatcaaccagatgccgtgtgtgtcgctgggtgagccggttgagcgcggc
gatgtactggctgatggcccgtctaccgatctcggtgaactggcgctgggccagaacatg
cgtgtcgcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtttccgag
cgtgtggttcaggaagaccgttttaccaccatccacattcaggaactggcgtgcgtgtcc
cgtgacaccaagctggggccggaagagatcaccgctgacatcccgaacgtgggtgaagcg
gcgctctccaagctggatgaatccggtatcgtgtatatcggtgcggaagtgaccggcggt
gacattctggtcggtaaagtgacgccgaaaggcgaaactcagctgacaccggaagagaaa
ctgctgcgcgctatcttcggtgagaaagcgtctgacgtgaaagactcttctctgcgtgtt
ccgaacggcgtttccggtacggttatcgacgtgcaggtctttacccgcgatggtgtggaa
aaagacaagcgcgcgctggaaatcgaagaaatgcagctcaagcaggccaagaaagacctg
accgaagagttgcagattctggaagccggtctgtttgcccgtattcacgacgtgctggtt
gccggtggtgttgaagccgagaaactggacaagctgccgcgcgagcgctggctggaactg
ggcctgactgacgaagacaaacagaatcagctggagcagttggccgagcagtacgacgaa
ctcaagcatgagttcgagaagaaactcgaagccaaacgccgcaaaatcactcagggtgac
gatctggcaccgggcgtgctgaagatcgtcaaagtgtatctggcggttaaacgtcagatc
cagccgggtgacaagatggcgggccgtcacggtaacaagggtgttatctccaagatcaac
ccgatcgaagatatgccttacgacgagaacggcacaccggttgacatcgtactgaacccg
ctgggcgtaccgtcacgtatgaacatcggtcagatcctggaaacccatctgggtatggca
gcgaaaggtatcggcgacaaaatcaacgccatgctcaagcagcatcaggaagtggctaaa
ctgcgtgagtttatccagcgcgcttatgatctgggcaacgacgtgcgccagaaagttgac
ctgaacaccttcagcgatgaagaagtgctgcgtctggctgagaacctgaaaaaaggtatg
ccgatcgccacaccggtgttcgacggtgccaaggaaaacgagatcaaagcgttgctgaaa
ctcggcgacttgccgacttccggtcagatcacgctgtttgacggccgtaccggtgagcag
ttcgagcgtccggttactgtcggctacatgtacatgctgaaactgaaccacttggttgat
gacaagatgcatgctcgttcgacgggttcttacagcctggttacccagcagccgctgggt
ggtaaagcacagttcggtggtcagcgcttcggtgagatggaagtgtgggcgctggaagct
tacggtgccgcttacaccttgcaggaaatgttgaccgtgaaatccgatgacgtgaacggc
cgtaccaagatgtacaaaaacatcgtggatggcgatcaccggatggaaccaggtatgccg
gagtccttcaacgtgttgttgaaagaaatccgctctctgggtatcaacatcgagctggaa
gaagagtaa |
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