Dickeya aquatica: DAQ1742_00377
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Entry
DAQ1742_00377 CDS
T06021
Symbol
rapZ
Name
(GenBank) Adaptor protein RapZ for GlmZ/GlmY sRNA degradation; glucosamine-6-phosphate regulated; NTPase
KO
K06958
RNase adapter protein RapZ
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daq03019
]
DAQ1742_00377 (rapZ)
Messenger RNA biogenesis [BR:
daq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DAQ1742_00377 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_16
AAA_28
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
SLM61482
UniProt:
A0A375A5Y6
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All DBs
Position
complement(386752..387606)
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AA seq
284 aa
AA seq
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MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPELAHSLAERNISAAVSIDVRNM
PESPDVLEHALTRLPQSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES
DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGYKHGIPIDADYV
FDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY
LTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatgattgtcagtggtcgttcaggttcaggaaaatccgtcgccctgcgtgca
ctggaagacatggggttctattgtgtcgataacctgccggtggtgctgttgccagagctg
gcacattcgctggcagagagaaacatttctgccgccgtcagtattgatgtgcgcaacatg
ccggaaagcccggatgtgctggagcacgcgctgacgcgcttgccgcaaagtttttcgccc
caattgctgttccttgacgccgatcgcaatacgttaatccgtcgctacagcgacacgcgt
cgtctgcacccgctttccagcaagaacctgtcgctggaaagcgcgattgacgaagagagc
gatttgctcgagccgctgcgctcacgcgccgacctgattatcgacacctcagaaatgtcg
gtgcatgagctggccgaaatgctgcgcacccggttactgggcaagcgcgagcgcgaattg
acgatggtgtttgaatcattcggctacaaacacggcatcccgattgatgccgactacgtg
tttgacgtgcgctttttgcctaacccgcactgggacccgaaactgcgcccgatgaccggg
ctggataaaccggtggcggcgtttcttgaccggcacaccgaagtccacaatttcatctac
cagacgcgcagctatctggagctgtggctgccgatgctcgaaaccaacaaccgcagctat
ctgaccgttgctatcggttgtaccggtggcaaacatcgctcggtgtacattgccgaacag
ctggcagactacttccgctcccgtggcaaaaacgtgcagtcgcgccaccgcacactggaa
aaacgtaaatcatga
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