Dickeya aquatica: DAQ1742_00684
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Entry
DAQ1742_00684 CDS
T06021
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
daq
Dickeya aquatica
Pathway
daq00550
Peptidoglycan biosynthesis
daq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DAQ1742_00684 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
daq01002
]
DAQ1742_00684 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
daq01011
]
DAQ1742_00684 (dacB)
Enzymes [BR:
daq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DAQ1742_00684 (dacB)
Peptidases and inhibitors [BR:
daq01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
DAQ1742_00684 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
daq01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DAQ1742_00684 (dacB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
SLM61769
UniProt:
A0A375A811
LinkDB
All DBs
Position
complement(686407..687840)
Genome browser
AA seq
477 aa
AA seq
DB search
MRFLSILTGFLCAIALNVAAAPIDEYTKYLPDGANLALIAQKVGASAPAIDYHSQQMALP
ASTQKVITALAALLQLGPDYRFVTTMESHGSVSNGVLRGNLIVRFSGDPSLKRQQIRNMV
QELKKRGLREINGDVLIDTSVFSSHDKAPGWPWNDMTQCFSAPPAAAIVDKNCFSISLYS
APKAGENAFIRVASYYPVHMFSEVRTLAKGSPDAPYCELDVVPGELNRFTVTGCLTQRAE
PLPLAFAVQDGASYAGAIVKDELQQAEIHLTGSLRRQSLPGTAGTVLTQTQSEPLHDLLT
TMLKKSDNMIADTVFRTIGHERFKVPGTWRAGSDAVRQILRQKAGIDLGNTIIVDGSGLS
RHNLIAPATMMQVLQYIAQHDTELNYIKMLPLAGYDGTLRYRGGLHEAGLDGKVSAKTGA
LQGVYNLAGFITTASGQRMAFVQYLSGYAVPPEDQKERRIPLVRFESRVYKDIYQNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttttatcgattctgactggctttctttgtgctatcgccctgaatgtggcggca
gctcccattgatgaatatacgaaatatttacctgatggagccaatctggcactgatagcc
caaaaagtgggagcatctgctcctgctatcgactatcacagccagcaaatggcgctgcca
gccagtacacagaaagtcattaccgcgctggcagcactgctgcaactgggtccagactat
cgttttgtcaccacaatggaaagccacggctcggtctcaaacggcgtattgcgcggcaat
ctgattgtacggttcagtggcgatccttcgctcaaacgtcagcaaattcgaaacatggta
caggaactgaaaaaacgtgggctgcgcgagattaatggtgatgttctgatcgatacctcg
gtattttccagccatgataaagcgccaggctggccctggaatgacatgacacaatgcttc
agtgctccccctgcggcagccattgtcgataaaaactgtttctccatttcactctacagt
gcccctaaagcgggagaaaacgcgtttattcgcgttgcctcttattacccagtacatatg
ttcagcgaggttagaacgctggcaaaaggctcaccggatgcgccatattgcgaactggat
gtggtgccaggggagcttaaccggtttactgttaccggttgtctgacacagcgggcagag
ccgctgcctctggcgttcgcagttcaggatggagccagctacgccggagccatcgttaag
gatgaattgcagcaagcagagatacatctcacaggcagtttacgtcgccaaagcttgccg
ggtacggcgggaacggtgttaacacaaacgcaatccgaaccgctgcatgacttattgacg
accatgctcaaaaaatcagacaacatgattgcagacacggtatttcgcaccatcggtcat
gaacgatttaaagtaccggggacctggcgggccggctctgatgcagtacgtcagatattg
cgccagaaagcaggtatcgaccttggcaacaccatcatcgttgatggctccggcttatcc
agacacaaccttatcgctcccgccaccatgatgcaggttctgcaatatatagctcaacat
gatacagagctgaactacattaagatgctgccactggccggttatgacggcacgctgcgc
tatcgcggtggcctgcacgaagccgggcttgatggcaaagtttcagcgaaaacgggggcc
ttgcaaggcgtctataatctggctggattcattaccacagccagcggtcaacgtatggca
tttgtgcaatacctgtccggctatgccgtgccaccagaagatcaaaaagaaaggcgcatt
ccactggtgcgtttcgaaagccgagtttataaagacatctaccaaaataactga
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