Dickeya aquatica: DAQ1742_00699
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Entry
DAQ1742_00699 CDS
T06021
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
daq03016
]
DAQ1742_00699 (truB)
Enzymes [BR:
daq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DAQ1742_00699 (truB)
Transfer RNA biogenesis [BR:
daq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DAQ1742_00699 (truB)
Prokaryotic type
DAQ1742_00699 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF5791
Motif
Other DBs
NCBI-ProteinID:
SLM61781
UniProt:
A0A375A736
LinkDB
All DBs
Position
700502..701458
Genome browser
AA seq
318 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPVCLG
EATKFSQYLLDADKRYRVIARLGQRTDTSDADGNVIAQRPVTFDNDALMQALDSFRGHTQ
QVPSMYSALKHEGRPLYEYARQGIVVEREARDITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPTARMVTLAQLQALHEQALAQEQPVGELLDDL
LLPMDTAVQAFPVVNLSAVVAGYLKLGQAVRAPDAPTQGMVRITEGESHKFIGMGEIDDE
GRVAPRRLVVENFPPSFA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcctcgtcgtcgtggtcgggatattcacggcgttttgttgttagacaaaccg
caaggcgcatcatccaacgatgtgctgcaaaaggtaaaacgcctgtttaatgccaacaaa
gctgggcacaccggtgcgcttgacccactggcaacgggcatgctgcctgtgtgcctcgga
gaagcgaccaaattttcccaatacttgttggatgcagataaacgctatcgtgttatcgcc
cgtcttgggcagcgaacggatacgtcagatgcagatggtaatgtgatagcacagcgtcct
gtcacatttgataatgatgcactgatgcaggccttagacagttttcgcggccatacccaa
caggttccttccatgtactcggctctgaaacacgaaggccgcccgctgtatgagtatgca
cgtcaaggcatagtggtagagcgtgaggctcgtgatatcacggtgtacgaactgcaattc
attcgctgggaaggggatgagctggagcttgaaatccactgctcgaaagggacttacatt
cgcaccattattgacgatctgggcgagaagctaggatgtggtgcgcatgttatctatctg
cgccgtttacaggtggcgacatacccgaccgcacggatggtgacactggcacaattgcag
gcactgcatgagcaggcgttggcgcaagagcaacctgtcggtgaactgttggatgacctg
ctgctaccgatggatactgccgtgcaggcatttcccgtggtcaacttatctgctgtcgtc
gcgggttacttaaagctcggtcaggcagtaagagcgccggatgcaccgacacaaggtatg
gtgcgtattacggaaggtgaatcccacaagtttattggcatgggtgaaattgatgatgaa
ggtcgcgtagcaccgcgtcggttagtcgtcgaaaactttcctccatcttttgcctga
DBGET
integrated database retrieval system
